RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 FAM74A1Q5RGS3 127 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 TOMM20LQ6UXN7 152 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ANGPTL5Q86XS5 388 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 IFT20Q8IY31 132 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 FAM216BQ8N7L0 139 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 OR10AG1Q8NH19 301 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 OR4K15Q8NH41 348 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 THEM6Q8WUY1 208 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ISOC1Q96CN7 298 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 BORCS8Q96FH0 119 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ZC2HC1AQ96GY0 325 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ZNF714Q96N38 554 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 GGACTQ9BVM4 153 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ANKRD31Q8N7Z5 1873 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 E9PCH4 1651 aa0.56□□□□□ -2.32
TM9SF3-203ENST00000464654 ANK2Q01484 3957 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 ASH1LQ9NR48 2969 aaKnown RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 MGAMO43451 1857 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 PRORSD1PA6NEY8 169 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 OR2T8A6NH00 312 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 KPNA4O00629 521 aaPredicted RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 LYRM1O43325 122 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 COX7CP15954 63 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 EIF3IQ13347 325 aaKnown RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 LINC00269Q8N2A0 174 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 ZNF431Q8TF32 576 aaPredicted RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 RMND5BQ96G75 393 aaPredicted RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 MCEEQ96PE7 176 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 MED11Q9P086 117 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 NAT8BQ9UHF3 227 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 PHRF1Q9P1Y6 1649 aaKnown RBP0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 ZGRF1Q86YA3 2104 aa0.55□□□□□ -2.32
TM9SF3-203ENST00000464654 TCOF1Q13428 1488 aaKnown RBP0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 IGLV3-32A0A0A0MS00 114 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 TRBV7-6A0A0J9YX20 115 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 E7EQ34 232 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 GABARAPH6UMI1 98 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 IFNA21P01568 189 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 IGHV3-33P01772 117 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 CD2P06729 351 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 S100A11P31949 105 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 POLR2HP52434 150 aaKnown RBP0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 HAGHLQ6PII5 290 aaPredicted RBP0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 LRRC18Q8N456 261 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 PLPP5Q8NEB5 264 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 DYDC1Q8WWB3 177 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 BORCS5Q969J3 196 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 AMELYQ99218 206 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 CCDC32Q9BV29 185 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 TMEM14CQ9P0S9 112 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 LAMTOR2Q9Y2Q5 125 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 MED31Q9Y3C7 131 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 BCL9O00512 1426 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 ARAP1Q96P48 1450 aa0.54□□□□□ -2.32
TM9SF3-203ENST00000464654 C9orf170A2RU37 121 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 C5orf67F2Z3F1 127 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 F8W1H4 67 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 PFDN1O60925 122 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 NBEAP1P0C6P0 100 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 MRPS36P82909 103 aaKnown RBP0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 FOXI2Q6ZQN5 318 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 TEN1Q86WV5 123 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 SELENOSQ9BQE4 189 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 EFCAB11Q9BUY7 163 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 TCEAL2Q9H3H9 227 aaPredicted RBP0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 NDUFAF1Q9Y375 327 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 ERBINQ96RT1 1412 aa0.53□□□□□ -2.32
TM9SF3-203ENST00000464654 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 ZFC3H1O60293 1989 aaKnown RBP0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 TRBV27A0A0K0K1C4 114 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 H3BRM9 83 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 FAM107AO95990 144 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 FABP4P15090 132 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 RPL7P18124 248 aaKnown RBP0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 RPS3P23396 243 aaKnown RBP eCLIP0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 TMEM128Q5BJH2 165 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 HRCT1Q6UXD1 115 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 SMIM15Q7Z3B0 74 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 SBSPONQ8IVN8 264 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 Q8N6K4 173 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 MORN4Q8NDC4 146 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 OR4B1Q8NGF8 309 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 OR9Q1Q8NGQ5 310 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 TANC2Q9HCD6 1990 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 FANCMQ8IYD8 2048 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 ZNF462Q96JM2 2506 aa0.52□□□□□ -2.33
TM9SF3-203ENST00000464654 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 A6NN06 94 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 H0YJX3 145 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 CITO14578 2027 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 KLF7O75840 302 aaPredicted RBP0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 DNAL4O96015 105 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 PRB4P10163 310 aaPredicted RBP0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 SDC2P34741 201 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 RPS28P62857 69 aaKnown RBP0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 MIR22HGQ0VDD5 57 aa0.51□□□□□ -2.33
TM9SF3-203ENST00000464654 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms