RNA–Protein interactions for RNA: ENST00000448892.1

LINC00884-202, long intergenic non-protein coding RNA 884, humanhuman

TSL 5 BASIC

Gene LINC00884, Length 2,680 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-202ENST00000448892 IGHV3-72A0A0B4J1Y9 119 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 TM4SF5O14894 197 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 FOXI1Q12951 378 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 FAM169BQ8N8A8 192 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 MUC3AQ02505 3323 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 TRAV40A0A0B4J280 105 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 SH2D1AO60880 128 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00884-202ENST00000448892 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
LINC00884-202ENST00000448892 IGFBP4P22692 258 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 PMS2CLQ68D20 193 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 DPM2O94777 84 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 C9orf106Q8NAJ2 232 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 PVRIGQ6DKI7 326 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
LINC00884-202ENST00000448892 BOD1L1Q8NFC6 3051 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 ENSAO43768 121 aaKnown RBP12.33□□□□□ -0.44
LINC00884-202ENST00000448892 RBP4P02753 201 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 VMA21Q3ZAQ7 101 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 C1orf162Q8NEQ5 155 aaPredicted RBP12.33□□□□□ -0.44
LINC00884-202ENST00000448892 GLMPQ8WWB7 406 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 RNF183Q96D59 192 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 TSPAN13O95857 204 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 GATA1P15976 413 aaPredicted RBP12.33□□□□□ -0.44
LINC00884-202ENST00000448892 CNTFRP26992 372 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
LINC00884-202ENST00000448892 XGP55808 180 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 SPRY4Q9C004 299 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 MRPL35Q9NZE8 188 aaKnown RBP12.33□□□□□ -0.44
LINC00884-202ENST00000448892 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
LINC00884-202ENST00000448892 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 PSMG4Q5JS54 123 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 RNF185Q96GF1 192 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
LINC00884-202ENST00000448892 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
LINC00884-202ENST00000448892 SCNM1Q9BWG6 230 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
LINC00884-202ENST00000448892 RASL11BQ9BPW5 248 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 TNRC18O15417 2968 aaPredicted RBP12.31□□□□□ -0.44
LINC00884-202ENST00000448892 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 M0R1B8 84 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 FCN3O75636 299 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
LINC00884-202ENST00000448892 KLRD1Q13241 179 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 ATP1A1-AS1Q5TC04 95 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 Q6ZUT4 128 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
LINC00884-202ENST00000448892 GATA4P43694 442 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 TAL2Q16559 108 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
LINC00884-202ENST00000448892 MAFAQ8NHW3 353 aaPredicted RBP12.3□□□□□ -0.44
LINC00884-202ENST00000448892 SHANK2-AS3Q9BTD1 123 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
LINC00884-202ENST00000448892 TACC2O95359 2948 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
LINC00884-202ENST00000448892 SRSF6Q13247 344 aaKnown RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 TMEM200BQ69YZ2 307 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 PTH2Q96A98 100 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 COL27A1Q8IZC6 1860 aaPredicted RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 IGHV1-46P01743 117 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 ZNF575Q86XF7 245 aa12.29□□□□□ -0.44
LINC00884-202ENST00000448892 RP1L1Q8IWN7 2480 aaPredicted RBP12.29□□□□□ -0.44
LINC00884-202ENST00000448892 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
LINC00884-202ENST00000448892 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 H3BRN7 92 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 K7EM74 188 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 ATP5LO75964 103 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 THBDP07204 575 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 CCL11P51671 97 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 Q8TAT8 98 aa12.28□□□□□ -0.44
LINC00884-202ENST00000448892 MRPS12O15235 138 aaKnown RBP12.27□□□□□ -0.44
LINC00884-202ENST00000448892 NDUFA3O95167 84 aa12.27□□□□□ -0.44
LINC00884-202ENST00000448892 GLRXP35754 106 aa12.27□□□□□ -0.44
LINC00884-202ENST00000448892 LYPD1Q8N2G4 141 aa12.27□□□□□ -0.44
LINC00884-202ENST00000448892 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.44
LINC00884-202ENST00000448892 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.44
LINC00884-202ENST00000448892 ERG28Q9UKR5 140 aa12.27□□□□□ -0.44
LINC00884-202ENST00000448892 IGLC6P0CF74 106 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms