RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 SH2D1AO60880 128 aa14.91□□□□□ -0.02
SNX17-202ENST00000427123 CRIP2P52943 208 aaPredicted RBP14.91□□□□□ -0.02
SNX17-202ENST00000427123 CHCHD1Q96BP2 118 aaKnown RBP14.91□□□□□ -0.02
SNX17-202ENST00000427123 URB1-AS1Q96HZ7 61 aa14.91□□□□□ -0.02
SNX17-202ENST00000427123 PRR25Q96S07 402 aa14.91□□□□□ -0.02
SNX17-202ENST00000427123 MED13LQ71F56 2210 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 BUB3O43684 328 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 C19orf54Q5BKX5 351 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 ATP6V0BQ99437 205 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 MEGF9Q9H1U4 602 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 TRAV41A0A0B4J266 112 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 CLPSL1A2RUU4 121 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 TMEM189A5PLL7 270 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 IGHG4P01861 327 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 PIFOQ8TCI5 191 aa14.9□□□□□ -0.02
SNX17-202ENST00000427123 PKD1L2Q7Z442 2459 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 FAM223BA6NKX1 122 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 ATP5J2P56134 94 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 ATP5G2Q06055 141 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 BRD3OSQ6XYD6 125 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 FAM223AQ8IWN6 122 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 MIEN1Q9BRT3 115 aa14.89□□□□□ -0.03
SNX17-202ENST00000427123 DMRTA1Q5VZB9 504 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 SLC50A1Q9BRV3 221 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 RAB4AP20338 218 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 HLA-DMBP28068 263 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 LCN12Q6JVE5 192 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 VGLL1Q99990 258 aa14.88□□□□□ -0.03
SNX17-202ENST00000427123 IGFL4Q6B9Z1 124 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 Q8TAT8 98 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 METTL26Q96S19 204 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 EREGO14944 169 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
SNX17-202ENST00000427123 CYB5R2Q6BCY4 276 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 TPPP3Q9BW30 176 aa14.87□□□□□ -0.03
SNX17-202ENST00000427123 IGHV4-30-2A0A087WSY4 118 aa14.86□□□□□ -0.03
SNX17-202ENST00000427123 BTF3P20290 206 aaKnown RBP14.86□□□□□ -0.03
SNX17-202ENST00000427123 BMI1P35226 326 aa14.86□□□□□ -0.03
SNX17-202ENST00000427123 MRPL52Q86TS9 123 aaKnown RBP14.86□□□□□ -0.03
SNX17-202ENST00000427123 CACNA1AO00555 2505 aa14.86□□□□□ -0.03
SNX17-202ENST00000427123 A0A1B0GV90 55 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 RBAKDNA6NC62 111 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 M0QZ24 198 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 LINC00614P0C842 121 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 IGHV4-38-2P0DP08 117 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 CTRLP40313 264 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 PMCHL1Q16048 86 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 EBLN2Q6P2I7 272 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 ZNF705AQ6ZN79 300 aaPredicted RBP14.85□□□□□ -0.03
SNX17-202ENST00000427123 ZNF493Q6ZR52 646 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 ZMAT5Q9UDW3 170 aaKnown RBP14.85□□□□□ -0.03
SNX17-202ENST00000427123 AKAP6Q13023 2319 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 IGHV1-24A0A0C4DH33 117 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 C2orf70A6NJV1 201 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 M0R143 59 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 SRSF2Q01130 221 aaKnown RBP14.85□□□□□ -0.03
SNX17-202ENST00000427123 SPATA45Q537H7 98 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 LYZL1Q6UWQ5 148 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 SNHG12Q9BXW3 62 aa14.85□□□□□ -0.03
SNX17-202ENST00000427123 TMSB15BA0A087X1C1 80 aa14.84□□□□□ -0.03
SNX17-202ENST00000427123 MSMBP08118 114 aa14.84□□□□□ -0.03
SNX17-202ENST00000427123 SPOCK3Q9BQ16 436 aa14.84□□□□□ -0.03
SNX17-202ENST00000427123 U3KQE9 123 aa14.84□□□□□ -0.03
SNX17-202ENST00000427123 IGHV3-66A0A0C4DH42 116 aa14.83□□□□□ -0.03
SNX17-202ENST00000427123 TRGV3P03979 118 aa14.83□□□□□ -0.03
SNX17-202ENST00000427123 IGF1P05019 195 aa14.83□□□□□ -0.03
SNX17-202ENST00000427123 ZNF80P51504 273 aaPredicted RBP14.83□□□□□ -0.04
SNX17-202ENST00000427123 A6NDX4 124 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 MRPL53Q96EL3 112 aaKnown RBP14.82□□□□□ -0.04
SNX17-202ENST00000427123 CLEC5AQ9NY25 188 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 LINC00527Q9UJ94 153 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 BRI3O95415 125 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 RNF182Q8N6D2 247 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 TMEM70Q9BUB7 260 aa14.82□□□□□ -0.04
SNX17-202ENST00000427123 PRAC2D3DTV9 90 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 H3BUA1 57 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 H3BUX3 64 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 M0QZK8 103 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 RNF224P0DH78 156 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 LINC00469Q8N7U9 141 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 FER1L6-AS1Q8NA97 138 aa14.81□□□□□ -0.04
SNX17-202ENST00000427123 IGHV3OR16-13A0A075B7E8 117 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 IGHV3-74A0A0B4J1X5 117 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 ZNF207O43670 478 aaKnown RBP14.8□□□□□ -0.04
SNX17-202ENST00000427123 IGHG2P01859 326 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 ARL3P36405 182 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 ERCC8Q13216 396 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 LY6EQ16553 131 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 LEPROTL1O95214 131 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 IGLC6P0CF74 106 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 DSCR9P59020 149 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
SNX17-202ENST00000427123 IGHV3-49A0A0A0MS15 119 aa14.79□□□□□ -0.04
SNX17-202ENST00000427123 TRAV8-2A0A0B4J237 113 aa14.79□□□□□ -0.04
SNX17-202ENST00000427123 TMEM213A2RRL7 107 aa14.79□□□□□ -0.04
SNX17-202ENST00000427123 FABP5P3A8MUU1 101 aa14.79□□□□□ -0.04
SNX17-202ENST00000427123 C8orf86Q6ZUL3 223 aa14.79□□□□□ -0.04
SNX17-202ENST00000427123 B4DSR2 109 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms