RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 IQCJQ1A5X6 159 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 RPP21Q9H633 154 aaKnown RBP11.93□□□□□ -0.5
MCF2L-205ENST00000397017 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 PAX1P15863 534 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 ASH1LQ9NR48 2969 aaKnown RBP11.92□□□□□ -0.5
MCF2L-205ENST00000397017 IGKV1D-37A0A075B6S9 117 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 BMI1P35226 326 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 DEFB1P60022 68 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 SIGLEC15Q6ZMC9 328 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 FMC1Q96HJ9 113 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 ATOH7Q8N100 152 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
MCF2L-205ENST00000397017 ODF3BA8MYP8 253 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 AVPP01185 164 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
MCF2L-205ENST00000397017 K7EN84 100 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 NPBQ8NG41 125 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
MCF2L-205ENST00000397017 TRBV12-3P01733 135 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 CTSGP08311 255 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.5
MCF2L-205ENST00000397017 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-205ENST00000397017 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 C8orf49Q96NF6 230 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 ID1P41134 155 aa11.9□□□□□ -0.5
MCF2L-205ENST00000397017 C9JCJ5 164 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 LY6LH3BQJ8 138 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 PSMG4Q5JS54 123 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 C5orf56Q8N8D9 126 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 OSTCQ9NRP0 149 aa11.9□□□□□ -0.51
MCF2L-205ENST00000397017 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 TRBV24-1A0A075B6N3 115 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 PFN1P07737 140 aaKnown RBP11.89□□□□□ -0.51
MCF2L-205ENST00000397017 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 Q6ZS46 218 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 TTC9CQ8N5M4 171 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 TXN2Q99757 166 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 CKS2P33552 79 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 RAB9AP51151 201 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 CRYBG3Q68DQ2 2970 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 C1orf159Q96HA4 380 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 SPRY2O43597 315 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 FXYD7P58549 80 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
MCF2L-205ENST00000397017 SERF1AO75920 110 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 FRMD6-AS1P0C7T7 363 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 HBBP68871 147 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 YPEL3P61236 119 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-205ENST00000397017 CDPF1Q6NVV7 123 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 F6UB75 175 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 NDUFA3O95167 84 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 OR8A1Q8NGG7 326 aa11.88□□□□□ -0.51
MCF2L-205ENST00000397017 SRSF8Q9BRL6 282 aaKnown RBP11.88□□□□□ -0.51
MCF2L-205ENST00000397017 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
MCF2L-205ENST00000397017 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-205ENST00000397017 CD99P14209 185 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 ZNF138P52744 262 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 VGLL1Q99990 258 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 PEF1Q9UBV8 284 aaKnown RBP11.87□□□□□ -0.51
MCF2L-205ENST00000397017 PHLDA3Q9Y5J5 127 aa11.87□□□□□ -0.51
MCF2L-205ENST00000397017 GATA3P23771 443 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 AARDQ4LEZ3 155 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 H3BRN7 92 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-205ENST00000397017 MT-ND6P03923 174 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 FAM162BQ5T6X4 162 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
MCF2L-205ENST00000397017 UTP20O75691 2785 aaKnown RBP11.85□□□□□ -0.51
MCF2L-205ENST00000397017 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 SNRPD3P62318 126 aaKnown RBP11.85□□□□□ -0.51
MCF2L-205ENST00000397017 DMRT1Q9Y5R6 373 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 CRYGBP07316 175 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 HOXA5P20719 270 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 Q86TA4 180 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 C20orf202A1L168 122 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 TCF21O43680 179 aa11.85□□□□□ -0.51
MCF2L-205ENST00000397017 PSG3Q16557 428 aa11.84□□□□□ -0.51
MCF2L-205ENST00000397017 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
MCF2L-205ENST00000397017 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 258.7 ms