RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FAM223BA6NKX1 122 aa12.98□□□□□ -0.33
NUP50-202ENST00000396096 C3orf79P0CE67 100 aa12.98□□□□□ -0.33
NUP50-202ENST00000396096 ATP5G2Q06055 141 aa12.98□□□□□ -0.33
NUP50-202ENST00000396096 FAM223AQ8IWN6 122 aa12.98□□□□□ -0.33
NUP50-202ENST00000396096 IGHV4-30-2A0A087WSY4 118 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
NUP50-202ENST00000396096 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 BRI3O95415 125 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 ARMS2P0C7Q2 107 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 NTF3P20783 257 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
NUP50-202ENST00000396096 TDRG1Q3Y452 100 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 BRD3OSQ6XYD6 125 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 CHCHD1Q96BP2 118 aaKnown RBP12.97□□□□□ -0.33
NUP50-202ENST00000396096 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 U3KQE9 123 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 SH2D1AO60880 128 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 CYB5R2Q6BCY4 276 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 RNASEKQ6P5S7 137 aaKnown RBP12.97□□□□□ -0.33
NUP50-202ENST00000396096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
NUP50-202ENST00000396096 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 TMEM189A5PLL7 270 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 RBAKDNA6NC62 111 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 IGF1P05019 195 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.33
NUP50-202ENST00000396096 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
NUP50-202ENST00000396096 LCN12Q6JVE5 192 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
NUP50-202ENST00000396096 FAM181BA6NEQ2 426 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 M0R2Z0 102 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 MSMBP08118 114 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 IGHV4-38-2P0DP08 117 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 ZNF493Q6ZR52 646 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 VGLL1Q99990 258 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 A6NDX4 124 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 RAB4AP20338 218 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 RPS20P60866 119 aaKnown RBP12.95□□□□□ -0.34
NUP50-202ENST00000396096 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 METTL26Q96S19 204 aa12.95□□□□□ -0.34
NUP50-202ENST00000396096 H3BUA1 57 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 RNF224P0DH78 156 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 BMI1P35226 326 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 DSCR9P59020 149 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 PRR31Q5SQ13 230 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 CFAP46Q8IYW2 2715 aa12.94□□□□□ -0.34
NUP50-202ENST00000396096 IGHG2P01859 326 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 CTRLP40313 264 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
NUP50-202ENST00000396096 MIEN1Q9BRT3 115 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 PAM16Q9Y3D7 125 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 C2orf70A6NJV1 201 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 M0QZK8 103 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
NUP50-202ENST00000396096 MRPL52Q86TS9 123 aaKnown RBP12.93□□□□□ -0.34
NUP50-202ENST00000396096 TRGV3P03979 118 aa12.92□□□□□ -0.34
NUP50-202ENST00000396096 LINC00614P0C842 121 aa12.92□□□□□ -0.34
NUP50-202ENST00000396096 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
NUP50-202ENST00000396096 LYZL1Q6UWQ5 148 aa12.92□□□□□ -0.34
NUP50-202ENST00000396096 Q8TAT8 98 aa12.92□□□□□ -0.34
NUP50-202ENST00000396096 BTF3P20290 206 aaKnown RBP12.91□□□□□ -0.34
NUP50-202ENST00000396096 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
NUP50-202ENST00000396096 PMCHL1Q16048 86 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 IGSF10Q6WRI0 2623 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 B4DSR2 109 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 H3BUX3 64 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 GATA3P23771 443 aa12.91□□□□□ -0.34
NUP50-202ENST00000396096 IGHV1-24A0A0C4DH33 117 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 IGLC6P0CF74 106 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 CLEC5AQ9NY25 188 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 LINC00527Q9UJ94 153 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 U3KQK5 164 aa12.9□□□□□ -0.34
NUP50-202ENST00000396096 ASH1LQ9NR48 2969 aaKnown RBP12.9□□□□□ -0.35
NUP50-202ENST00000396096 CACNA1BQ00975 2339 aa12.9□□□□□ -0.35
NUP50-202ENST00000396096 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 M0QZ24 198 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 ARL3P36405 182 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 ZNF575Q86XF7 245 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 TPPP3Q9BW30 176 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 TMSB15BA0A087X1C1 80 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 M0R143 59 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 EREGO14944 169 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
NUP50-202ENST00000396096 ERCC8Q13216 396 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 LY6EQ16553 131 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 C8orf86Q6ZUL3 223 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
NUP50-202ENST00000396096 PPP1R14DQ9NXH3 145 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms