RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
KCNQ3-201ENST00000388996 VCYO14598 125 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 CPAMD8Q8IZJ3 1885 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 GATA3P23771 443 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 PDE6HQ13956 83 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 LINC01551Q86U37 167 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 BMPERQ8N8U9 685 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 AKAP13Q12802 2813 aa10.02□□□□□ -0.8
KCNQ3-201ENST00000388996 PSG3Q16557 428 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 Q6ZS92 163 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 Q6ZS49 121 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 RASL10AQ92737 203 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 GLRX5Q86SX6 157 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 SHANK2-AS3Q9BTD1 123 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 Q86TA4 180 aa10.02□□□□□ -0.81
KCNQ3-201ENST00000388996 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 LY96Q9Y6Y9 160 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 GATA4P43694 442 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 ZNF329Q86UD4 541 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 UBE2CO00762 179 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 LYPD1Q8N2G4 141 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 ZNF479Q96JC4 524 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 NDUFS8O00217 210 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 LY6HO94772 140 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 LSM4Q9Y4Z0 139 aaKnown RBP10.01□□□□□ -0.81
KCNQ3-201ENST00000388996 C5orf63A6NC05 138 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 A8MWV9 139 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 IGHG3P01860 377 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 ERG28Q9UKR5 140 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 QRFPP83859 136 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 BPESC1Q9GZL8 116 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 MEGF9Q9H1U4 602 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 A0A087WWL8 130 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 NPC2P61916 151 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 COL8A2P25067 703 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
KCNQ3-201ENST00000388996 RPRMLQ8N4K4 120 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 Q8TCH9 128 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 LAMTOR3Q9UHA4 124 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 E7EQL1 145 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 GAGE13Q4V321 117 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 TRAV8-1A0A0A6YYK1 113 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 FNDC10F2Z333 226 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 PRTN3P24158 256 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 AMBPP02760 352 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 IGKV1-16P04430 117 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
KCNQ3-201ENST00000388996 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 MSMBP08118 114 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 LGALS1P09382 135 aaKnown RBP9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 RNASE2P10153 161 aaKnown RBP9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 RNF223E7ERA6 249 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 TMEM14BQ9NUH8 114 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 A6NNC1 897 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 RIPPLY3P57055 190 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 MSRB2Q9Y3D2 182 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 LRP4O75096 1905 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 SYNJ2BPP57105 145 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
KCNQ3-201ENST00000388996 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 NTF4P34130 210 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 PRR31Q5SQ13 230 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 DMRTC2Q8IXT2 367 aaPredicted RBP9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 ANAPC13Q9BS18 74 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 ITGB1BP1O14713 200 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 IL17RELQ6ZVW7 336 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 IGHV2-70DA0A0C4DH43 119 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 BPTFQ12830 3046 aa9.97□□□□□ -0.81
KCNQ3-201ENST00000388996 RUSC1-AS1Q66K80 236 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 CXCL1P09341 107 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 SS18Q15532 418 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.81
KCNQ3-201ENST00000388996 OVOL3O00110 214 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms