RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 VSTM5A8MXK1 200 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 Q6ZT83 130 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 ABCA1O95477 2261 aa12.35□□□□□ -0.43
CSNK1A1-202ENST00000377843 SPRY3O43610 288 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 APOMO95445 188 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 IGKCP01834 107 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 CKS2P33552 79 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 XGP55808 180 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 FOXI1Q12951 378 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 RRN3P1Q2M238 152 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 C6orf15Q6UXA7 325 aaPredicted RBP12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 GAFA1Q96PS6 74 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 HIGD1AQ9Y241 93 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 Q6AWC8 147 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 SS18L2Q9UHA2 77 aa12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
CSNK1A1-202ENST00000377843 M0R3E3 92 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 EVI2AP22794 236 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 LEPP41159 167 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 ATP1A1-AS1Q5TC04 95 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 CNEP1R1Q8N9A8 125 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.43
CSNK1A1-202ENST00000377843 PRSS1P07477 247 aa12.33□□□□□ -0.44
CSNK1A1-202ENST00000377843 FOXC2Q99958 501 aa12.33□□□□□ -0.44
CSNK1A1-202ENST00000377843 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
CSNK1A1-202ENST00000377843 MED13Q9UHV7 2174 aa12.33□□□□□ -0.44
CSNK1A1-202ENST00000377843 TRGV5A0A0B4J1U4 118 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 SRSF1Q07955 248 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 KLF17Q5JT82 389 aaPredicted RBP12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 TCF15Q12870 199 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 AGRNO00468 2067 aa12.32□□□□□ -0.44
CSNK1A1-202ENST00000377843 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 SRSF6Q13247 344 aaKnown RBP12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 CCL3L1P16619 93 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 MZT1Q08AG7 82 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 MORN3Q6PF18 240 aaPredicted RBP12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 Q6ZUT4 128 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 OR4C13Q8NGP0 309 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 TMEM160Q9NX00 188 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 CADP27708 2225 aa12.31□□□□□ -0.44
CSNK1A1-202ENST00000377843 SH2D1AO60880 128 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 FCER1GP30273 86 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 KLRD1Q13241 179 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 RNF185Q96GF1 192 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 CYSLTR1Q9Y271 337 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 ZNF575Q86XF7 245 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 MDS2Q8NDY4 140 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 ERG28Q9UKR5 140 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 ATMQ13315 3056 aa12.3□□□□□ -0.44
CSNK1A1-202ENST00000377843 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 DPM2O94777 84 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 GATA1P15976 413 aaPredicted RBP12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 TWIST1Q15672 202 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 PTH2Q96A98 100 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 CFAP126Q5VTH2 177 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 HIST1H4GQ99525 98 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 RAI1Q7Z5J4 1906 aaPredicted RBP12.29□□□□□ -0.44
CSNK1A1-202ENST00000377843 PGPEP1Q9NXJ5 209 aa12.28□□□□□ -0.44
CSNK1A1-202ENST00000377843 LINC01546A6NGU7 62 aa12.28□□□□□ -0.44
CSNK1A1-202ENST00000377843 TMEM158Q8WZ71 300 aa12.28□□□□□ -0.44
CSNK1A1-202ENST00000377843 NGBQ9NPG2 151 aa12.28□□□□□ -0.44
CSNK1A1-202ENST00000377843 IGHV3-72A0A0B4J1Y9 119 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 OR11H12B2RN74 326 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 KLRC4-KLRK1H3BQV0 150 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 OR11H1Q8NG94 326 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 OR11H2Q8NH07 326 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 CARD19Q96LW7 228 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.44
CSNK1A1-202ENST00000377843 CACNA1GO43497 2377 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 FCN3O75636 299 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 TAL2Q16559 108 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 ICE1Q9Y2F5 2266 aa12.27□□□□□ -0.45
CSNK1A1-202ENST00000377843 RBP4P02753 201 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 HLA-DRB4P13762 266 aa12.26□□□□□ -0.45
CSNK1A1-202ENST00000377843 CNTFRP26992 372 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms