RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IGKV3-7A0A075B6H7 116 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 RAB37Q96AX2 223 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 DOPEY2Q9Y3R5 2298 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 IGHV3OR16-10A0A075B7F0 116 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 SH2D1AO60880 128 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 SCGB2A1O75556 95 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 C5orf64Q2M2E5 130 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 C8orf31Q8N9H6 132 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 VPS25Q9BRG1 176 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 NDFIP1Q9BT67 221 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 HIVEP3Q5T1R4 2406 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 H3BRN7 92 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 LOXL1Q08397 574 aaPredicted RBP10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 SMIM12Q96EX1 92 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 UFC1Q9Y3C8 167 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 NDUFS7O75251 213 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 EVI2AP22794 236 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 TCF15Q12870 199 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
HMGCS1-201ENST00000325110 RPL7P18124 248 aaKnown RBP10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 UBE2V1Q13404 147 aa10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 VKORC1Q9BQB6 163 aa10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 LINC00527Q9UJ94 153 aa10.15□□□□□ -0.79
HMGCS1-201ENST00000325110 HAX1O00165 279 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 IGLV2-11P01706 119 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 PRSS1P07477 247 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 PET117Q6UWS5 81 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 RABAC1Q9UI14 185 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 CACNA1AO00555 2505 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 TNFRSF13BO14836 293 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 CRYGBP07316 175 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 ERCC8Q13216 396 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 IGF2-ASQ6U949 168 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 HIF1ANQ9NWT6 349 aa10.14□□□□□ -0.79
HMGCS1-201ENST00000325110 PLP1P60201 277 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 NDPQ00604 133 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 CRIP1P50238 77 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 RPL11P62913 178 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 FER1L6-AS1Q8NA97 138 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 NEU4Q8WWR8 484 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 VGLL1Q99990 258 aa10.13□□□□□ -0.79
HMGCS1-201ENST00000325110 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 VMO1Q7Z5L0 202 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
HMGCS1-201ENST00000325110 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 CLEC3BP05452 202 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 CCDC144NLQ6NUI1 221 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 ZNF747Q9BV97 191 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 PSG9Q00887 426 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 BVES-AS1Q5T3Y7 98 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 PRSS57Q6UWY2 283 aa10.11□□□□□ -0.79
HMGCS1-201ENST00000325110 EGR2P11161 476 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 CDSNQ15517 529 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 JKAMPQ9P055 326 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 NPYP01303 97 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 SAPCD1Q5SSQ6 148 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 FCER1GP30273 86 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 BMI1P35226 326 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 PRR25Q96S07 402 aa10.1□□□□□ -0.79
HMGCS1-201ENST00000325110 C7orf71A4D174 169 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 RHOGP84095 191 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 FAM104BQ5XKR9 115 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 Q6AWC8 147 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 DCHS2Q6V1P9 2916 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 NPIPB6E9PJ23 425 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 G3V318 75 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 HIST1H1AQ02539 215 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
HMGCS1-201ENST00000325110 ACACBO00763 2458 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 HBDP02042 147 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 COL12A1Q99715 3063 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 RNF5Q99942 180 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 PRTN3P24158 256 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 LYPD1Q8N2G4 141 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 SVEP1Q4LDE5 3571 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms