RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 PCNX2A6NKB5 2137 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 K7ESF4 209 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 LYZL6O75951 148 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 TNFRSF1AP19438 455 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 PSMB2P49721 201 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 SPRNQ5BIV9 151 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 PPP1R35Q8TAP8 253 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 C17orf77Q96MU5 243 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 DNAJC13O75165 2243 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 HOXA3O43365 443 aaPredicted RBP6.26□□□□□ -1.41
RTL3-201ENST00000321110 TWIST1Q15672 202 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 FAM201AQ5SY85 155 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 AJUBAQ96IF1 538 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 TRGV9Q99603 122 aa6.26□□□□□ -1.41
RTL3-201ENST00000321110 MRPL20Q9BYC9 149 aaKnown RBP6.26□□□□□ -1.41
RTL3-201ENST00000321110 IL4P05112 153 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 SRD5A1P18405 259 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 IGHV1-2P23083 117 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 HCP5Q6MZN7 132 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 PRR14LQ5THK1 2151 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 TRBV20-1A0A075B6N2 111 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 A0A1W2PPI3 338 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 RHODO00212 210 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 ZNF688P0C7X2 276 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 CXCL12P48061 93 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 SUB1P53999 127 aaKnown RBP eCLIP6.25□□□□□ -1.41
RTL3-201ENST00000321110 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 TTTY12Q9BZ98 90 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 YAE1D1Q9NRH1 226 aa6.25□□□□□ -1.41
RTL3-201ENST00000321110 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 ATP5LO75964 103 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE7O76087 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE12FP0CL80 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE12GP0CL81 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE12IP0CL82 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
RTL3-201ENST00000321110 LYZP61626 148 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GAGE4Q13068 117 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 TMEM167AQ8TBQ9 72 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
RTL3-201ENST00000321110 VCX2Q9H322 139 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 HIGD1AQ9Y241 93 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 A0A087WX48 190 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 FABP5P3A8MUU1 101 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 M0R3E3 92 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 SH2D1AO60880 128 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
RTL3-201ENST00000321110 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 TMEM14CQ9P0S9 112 aa6.24□□□□□ -1.41
RTL3-201ENST00000321110 LINC01619G3V211 115 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 IGHG4P01861 327 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 APELAP0DMC3 54 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 UBE2D3P61077 147 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 UBE2D2P62837 147 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 RPEQ96AT9 228 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 RPUSD1Q9UJJ7 312 aaKnown RBP6.23□□□□□ -1.41
RTL3-201ENST00000321110 CRLF1O75462 422 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 NDUFA3O95167 84 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 PRTN3P24158 256 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 CCL11P51671 97 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 ZNF833PQ6ZTB9 187 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 SBSPONQ8IVN8 264 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 FBXL15Q9H469 300 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
RTL3-201ENST00000321110 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 NCBP2LA6PVI3 153 aaKnown RBP6.22□□□□□ -1.41
RTL3-201ENST00000321110 TCL1BO95988 128 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 ID1P41134 155 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 MSMPQ1L6U9 139 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 MRGPRG-AS1Q2M3A8 158 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 SPXQ9BT56 116 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
RTL3-201ENST00000321110 CTSZQ9UBR2 303 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 IGLV2-18A0A075B6J9 118 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
RTL3-201ENST00000321110 EGR2P11161 476 aaPredicted RBP6.22□□□□□ -1.41
RTL3-201ENST00000321110 UBE2D1P51668 147 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 RAB1BQ9H0U4 201 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 RAB9BQ9NP90 201 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 PLXNB1O43157 2135 aa6.22□□□□□ -1.41
RTL3-201ENST00000321110 DSPP15924 2871 aaKnown RBP6.21□□□□□ -1.41
RTL3-201ENST00000321110 CENPVL3A0A0U1RRI6 287 aa6.21□□□□□ -1.41
RTL3-201ENST00000321110 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.41
RTL3-201ENST00000321110 TGFAP01135 160 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms