RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CFHR3Q02985 330 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 RIGQ13278 110 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 EEF1AKMT3Q96AZ1 226 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 IGHV4-61A0A0C4DH41 118 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 A6NDX4 124 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 IGHV3-23P01764 117 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
MSH3-201ENST00000265081 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
MSH3-201ENST00000265081 RPS20P60866 119 aaKnown RBP8.59□□□□□ -1.03
MSH3-201ENST00000265081 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 HIF1ANQ9NWT6 349 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 IGF2RP11717 2491 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 OR5AL1P0C617 328 aa8.59□□□□□ -1.04
MSH3-201ENST00000265081 CSN1S1P47710 185 aa8.59□□□□□ -1.04
MSH3-201ENST00000265081 A0A096LNT2 108 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 ZNF705FA8MVS1 300 aaPredicted RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 M0QZK8 103 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 ZNF705DP0CH99 300 aaPredicted RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 ZNF705BP0CI00 300 aaPredicted RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 ZNF80P51504 273 aaPredicted RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 ABCA4P78363 2273 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.58□□□□□ -1.04
MSH3-201ENST00000265081 IGHG2P01859 326 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 CLEC3BP05452 202 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 LINC00614P0C842 121 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 VGLL1Q99990 258 aa8.58□□□□□ -1.04
MSH3-201ENST00000265081 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
MSH3-201ENST00000265081 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
MSH3-201ENST00000265081 GPR183P32249 361 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 KRTDAPP60985 99 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 LCN12Q6JVE5 192 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 G3V318 75 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 RELQ04864 619 aaPredicted RBP8.57□□□□□ -1.04
MSH3-201ENST00000265081 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 A0A1B0GV90 55 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 M0R143 59 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 M0R2Z0 102 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 SOCS3O14543 225 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 C9orf47Q6ZRZ4 202 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 CCL19Q99731 98 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
MSH3-201ENST00000265081 TRAV41A0A0B4J266 112 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 HSBP1O75506 76 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 IGLV1-40P01703 118 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 HIVEP3Q5T1R4 2406 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 BMI1P35226 326 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 SSTP61278 116 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 ECSCRQ19T08 205 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 DEFB125Q8N687 156 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 FAM19A4Q96LR4 140 aa8.56□□□□□ -1.04
MSH3-201ENST00000265081 A0A096LNJ9 63 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 TMEM189A5PLL7 270 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 SPATA45Q537H7 98 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
MSH3-201ENST00000265081 CT45A10P0DMU9 189 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
MSH3-201ENST00000265081 LYZL1Q6UWQ5 148 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 ASCL2Q99929 193 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 HLA-DMBP28068 263 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
MSH3-201ENST00000265081 PRSS47A8MTI9 375 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 DSCR9P59020 149 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 CLEC19AQ6UXS0 136 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 NDUFA4O00483 81 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 RNF224P0DH78 156 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 TMEM191AQ9H0A3 160 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 IGHV4-30-2A0A087WSY4 118 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 IGHV4-38-2P0DP08 117 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 GATA3P23771 443 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 PET117Q6UWS5 81 aa8.54□□□□□ -1.04
MSH3-201ENST00000265081 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
MSH3-201ENST00000265081 MRPS16Q9Y3D3 137 aaKnown RBP8.53□□□□□ -1.04
MSH3-201ENST00000265081 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
MSH3-201ENST00000265081 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
MSH3-201ENST00000265081 METTL26Q96S19 204 aa8.53□□□□□ -1.04
MSH3-201ENST00000265081 MSMBP08118 114 aa8.53□□□□□ -1.04
MSH3-201ENST00000265081 M0QZ24 198 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 LAMTOR2Q9Y2Q5 125 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms