RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Prr13Q9CQJ5 137 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Tctex1d1Q9D5I4 173 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Prss37Q9DAA4 237 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Fgf16Q9ESL8 207 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 GlmpQ9JHJ3 404 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ighv1-78A0A0G2JGN3 117 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm20422E9PUR3 255 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 ElocP83940 112 aaKnown RBP7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Zfp874bQ7M6X2 447 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr1373Q7TQT6 311 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr477Q8VGI6 310 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ifitm2Q99J93 144 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Popdc3Q9ES81 291 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Grin2aP35436 1464 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm5239D3YYZ2 122 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm10542F6XDR3 90 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm10134F6ZQC6 126 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gcm2O09102 504 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Igk-V19-17P01633 149 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hist1h2bfP10853 126 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 SelenohQ3UQA7 116 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr139Q60891 315 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hist1h2bbQ64475 126 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hist1h2bpQ8CGP2 126 aaKnown RBP7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Slc50a1Q9CXK4 221 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 C1ql3Q9ESN4 255 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 MiipA2A7Y5 387 aa7.52□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Socs1O35716 212 aa7.52□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Igh-VJ558P01758 117 aa7.52□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Znf668Q8K2R5 619 aa7.52□□□□□ -1.2
Clcn3-202ENSMUST00000056508 FancaQ9JL70 1439 aa7.52□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Zfp971A2BFG8 470 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Tex54G3UW99 86 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 1700067P10RikG3X8U2 183 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Edil3O35474 480 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 AF067061O70616 171 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 P01727 129 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Lyl1P27792 278 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Rps24P62849 133 aaKnown RBP7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Pex7P97865 318 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Zfp970Q08BU3 522 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Mob4Q6PEB6 225 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Vmn1r234Q8R298 329 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Ighv4-1A0A075B5R5 116 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Zfp433A0A0J9YUD4 600 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Gm45521A0A1B0GRK0 198 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Gm32687A0A1W2P6H7 600 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Galr3O88853 370 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Cryba1P02525 198 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Pax1P09084 446 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 PolP10400 120 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 PlaurP35456 327 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Hoxc4Q08624 264 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 SelenoiQ80TA1 398 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Pdlim5Q8CI51 591 aaKnown RBP7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Tmem106aQ8VC04 261 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Olfr510Q8VEW6 314 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Shisal2bQ9D1Y9 158 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Lyzl6Q9DA11 148 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Crybb3Q9JJU9 211 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Cldn14Q9Z0S3 239 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Wfdc16A2A5H4 111 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Cdkn2bP55271 130 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Q4KKZ1 196 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Dleu7Q8CHZ8 209 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 P01654 111 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 P01656 111 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Hist1h2bmP10854 126 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Hist1h2bhQ64478 126 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Hist2h2bbQ64525 126 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Vstm2lQ6PDS0 220 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Hist1h2bcQ6ZWY9 126 aaKnown RBP7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Tmem106bQ80X71 275 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Gm5148Q8BGG2 154 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Vmn1r201Q8R262 300 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Cd99Q8VCN6 175 aa7.52□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Fam136b-psA0A140T8T1 138 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Vpreb2P13373 142 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 CdsnQ7TPC1 561 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Olfr985Q8VGB4 311 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Cox6cQ9CPQ1 76 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Tex43Q9D9I1 141 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Smim10l1A0A087WNQ7 89 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Gm42517A0A1Y7VLQ2 374 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Smim13E9Q942 88 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 RprmlQ3URD2 117 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Ang6Q5GAN0 147 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 MavsQ8VCF0 503 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Ighv1-64A0A075B5X3 117 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Olfr432E9Q8M2 312 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 A630076J17RikJ3QQ32 107 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Nkx2-8O70584 235 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Folr1P35846 255 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Rnd3P61588 244 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Dnajc15Q78YY6 149 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 C1qtnf4Q8R066 326 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 4930583I09RikQ9D2E3 102 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Tax1bp3Q9DBG9 124 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Spry2Q9QXV8 315 aa7.51□□□□□ -1.21
Clcn3-202ENSMUST00000056508 Irf2bp2E9Q1P8 570 aa7.51□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms