RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tceal8Q9CZY2 117 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 9130008F23RikQ9D2Z6 181 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cldn10Q9Z0S6 231 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cacna1eQ61290 2272 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ighv14-4A0A0A6YVR1 117 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1445Q8VFW9 314 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Foxj2Q9ES18 565 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ndufb11O09111 151 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Nkx3-1P97436 237 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 1700009N14RikQ14AA6 216 aaKnown RBP9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Smim7Q5RKS2 75 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr823Q7TRH2 315 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr824Q8VFU4 315 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ighv1-76A0A0G2JFE9 117 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1289A0A288CFY5 326 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr747E9PXH6 313 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Lgals1P16045 135 aaKnown RBP9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Shisa3Q3UPR0 238 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr996Q7TRA0 314 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pitpnc1Q8K4R4 332 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Srsf10Q9R0U0 262 aaKnown RBP9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm21882J3QN86 361 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 A3galt2Q3V1N9 370 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Fam168aQ8BGZ2 244 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Prr15Q9D1T5 122 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Slc25a15Q9WVD5 301 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ccl1P10146 92 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 P18526 117 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm5615Q3UW02 101 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1026Q7TR90 307 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mad2l1bpQ9DCX1 276 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pus1Q9WU56 423 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1436A0PK57 315 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ankrd66J3QNN4 192 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Dnd1Q6VY05 352 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 GaptQ8CB93 157 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 H2afb1Q9CQ70 111 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Vmn1r46Q9EQ45 309 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mpdu1Q9R0Q9 247 aa9.99□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Kif26bQ7TNC6 2112 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cep295Q8BQ48 2412 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Nudt10P0C027 164 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Nudt11P0C028 164 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Folr2Q05685 251 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Glrx2Q923X4 156 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cmtm2bQ9DAC0 210 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Zfp930A0A1D5RM15 441 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Znf385cA2A5E6 429 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Serf2P84102 59 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Zfp92Q62396 488 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Il31Q6EAL8 163 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ccdc198Q9CPZ1 294 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pgpep1lQ9CWB5 130 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ctnnbip1Q9JJN6 81 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mixl1Q9WUI0 231 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Sumo3Q9Z172 110 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Igkv4-63A0A0G2JFU6 117 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rnd3P61588 244 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Hist1h3aP68433 136 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 UngP97931 306 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rtl4Q3URY0 304 aa9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mbnl2Q8C181 373 aaKnown RBP9.98□□□□□ -0.81
Pcif1-201ENSMUST00000041643 OdamA1E960 273 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Thap8E9Q695 213 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Twist1P26687 206 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Dhrs2Q149L0 282 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Trat1Q3UU67 187 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Slc25a31Q3V132 320 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm10334Q792Y8 246 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1204Q7TR10 309 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mrpl13Q9D1P0 178 aaKnown RBP9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Sec11cQ9D8V7 192 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 HeylQ9DBX7 326 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 AvpP35455 168 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Sult2a1P52843 285 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mob3bQ8VE04 216 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Dynlrb2Q9DAJ5 96 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr972Q9EQA2 314 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm10665K7N6B7 321 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mrps21P58059 87 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1168Q7TR25 312 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 C330021F23RikQ8C7T0 141 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 CrhQ8CIT0 187 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Elovl1Q9JLJ5 279 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rnd2Q9QYM5 227 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Arl3Q9WUL7 182 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm14548E9Q1Z6 680 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 NgfP01139 241 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 P04946 108 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pax9P47242 342 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Dnajc30P59041 219 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mrpl33Q9CQP0 65 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rsg1A2A825 258 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 CortP56469 109 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Fam3dP97805 223 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Q3UZV7 1028 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Scrt1Q99M85 348 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 H2al3Q9D4U4 128 aa9.97□□□□□ -0.81
Pcif1-201ENSMUST00000041643 MpdzQ8VBX6 2055 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cpsf4lE9Q2N0 280 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms