RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tmem240B2RWJ3 173 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Zfp97E9PZP6 546 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Zfp960L7N267 546 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ppp1r27Q9D119 154 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Myoz1Q9JK37 296 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Foxr2Q3UM89 302 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Crispld2Q8BZQ2 495 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Aqp3Q8R2N1 292 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Sf3b5Q923D4 86 aaKnown RBP12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 UcnP81615 122 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr975Q8VG91 310 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Fcgr4A0A0B4J1G0 249 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm21394Q497R7 227 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ms4a13Q5FWC3 203 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Arrdc2Q9D668 407 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tex38A2A8T7 201 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Nxph1Q61200 271 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 GfralQ6SJE0 393 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr195Q8VGQ6 308 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cdk2ap2Q9CPY4 127 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 PpicP30412 212 aaKnown RBP12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr1028Q7TR89 324 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Plppr5Q8BJ52 321 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Fdx2Q9CPW2 174 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 9130008F23RikQ9D2Z6 181 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Lrrk1Q3UHC2 2014 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Bak1O08734 209 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Mesp1P97309 243 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav3-3Q5R1C3 114 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Prr23a3Q9CWP9 254 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Nupr1Q9WTK0 80 aa12.12□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ascl5M0QWB7 188 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Hyls1Q9CXX0 307 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Kcne4Q9WTW3 170 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Kiss1rQ91V45 396 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 PrndQ9QUG3 179 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gli3Q61602 1583 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cfap46E9Q2C0 2641 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm11444F6QMA6 170 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm20873J3QMQ9 232 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Psg16Q8K0U8 395 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Abhd17aQ99JW1 310 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr958Q8VEY3 312 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr33Q8VGX7 318 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Adamtsl3G3UXC7 1706 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 C1ql1O88992 258 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 NgfP01139 241 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr91Q7TRL3 312 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Acer2Q8VD53 275 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Pcnx1Q9QYC1 2344 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Prss32E9Q409 334 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Vstm2lQ6PDS0 220 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Plscr2Q9DCW2 307 aa12.11□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav7-5A0A0G2JFX6 112 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Igkv10-96A0A140T8M1 115 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm45783A0A1B0GT48 74 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr1016A2ASV2 309 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Pcp4P63054 62 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav3-1Q5R1I8 114 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Plxdc1Q91ZV7 500 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Slc52a3Q9D6X5 460 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rnf7Q9WTZ1 113 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm45736A0A1B0GS18 427 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 PnkdQ69ZP3 385 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Vkorc1l1Q6TEK5 176 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav7n-5A0A075B604 112 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm5089A1L3C8 106 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tstd1E9PY03 133 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rtl6Q505G4 243 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 CompQ9R0G6 755 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 CtgfP29268 348 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Upk2P38575 184 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gpx2Q9JHC0 190 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav3n-3A0A0G2JEM0 114 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Defa27F2Z403 93 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Klf17Q8CFA7 341 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Slc25a10Q9QZD8 287 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Igkv17-127A0A0G2JDN5 117 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Igkv6-29A0A0G2JEI6 115 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 NmsQ5H8A1 153 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Lhfpl4Q5U4E0 247 aa12.1□□□□□ -0.47
Col5a1-201ENSMUST00000028280 P01665 111 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 P01666 111 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Bsph1Q3UW26 133 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Oc90Q9Z0L3 485 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Thsd7aQ69ZU6 1645 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rnf212F6TQD1 307 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Timp1P12032 205 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rag2P21784 527 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Atg4dQ8BGV9 474 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Elovl5Q8BHI7 299 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr1260Q8VGN9 310 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Znf431E9QAG8 526 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tnfsf12O54907 249 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ucp3P56501 308 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rpl31P62900 125 aaKnown RBP12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 TslpQ9JIE6 140 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cbln1Q9R171 193 aa12.09□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Wnk1P83741 2377 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms