RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Morn2Q6UL01 79 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr338Q8VGK6 306 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 H1fooQ8VIK3 304 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Loxl4Q924C6 757 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 P01806 116 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 OsmP53347 263 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Crebl2Q32M00 123 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ctxn2Q3URE8 81 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Hand1Q64279 216 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sfxn3Q91V61 321 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sval2Q99N75 144 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm28845A0A087WR76 214 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ighv1-47A0A0A6YY41 117 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Wdr86D3Z757 380 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr466E9Q2B9 308 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sc5dO88822 299 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Lgals3P16110 264 aaKnown RBP13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Tspan7Q62283 249 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Mob3bQ8VE04 216 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Fbxo25Q9D2Y6 357 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm14443A2ARX0 610 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr1471F6QVZ8 314 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Prss2P07146 246 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Pet117P0DJF2 80 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 KrasP32883 189 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ifi27l2bQ8VC49 283 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr344Q8VFP9 309 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Dusp3Q9D7X3 185 aa13.6□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm45871A0A1B0GRI9 540 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr1053L7MU59 313 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Nkx2-8O70584 235 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gng7Q61016 68 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 HrasQ61411 189 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Zfp273Q7M6W8 501 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr1269Q8VEZ2 309 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Vkorc1Q9CRC0 161 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Btbd17Q9DB72 478 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sp5Q9JHX2 398 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Opn3Q9WUK7 400 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Vsig2Q9Z109 328 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ighv1-34A0A075B5V2 117 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ighv1-76A0A0G2JFE9 117 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Cpsf4lE9Q2N0 280 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 PtcraP0C6B2 199 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ctdsp1P58466 261 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Pom121l2Q5SW25 972 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr335-psQ7TRY6 312 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Paqr8Q80ZE5 354 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 IqcjQ8BPW0 110 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 4930474N05RikQ8BVR5 218 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Neil3Q8K203 606 aaKnown RBP13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr523Q8VFE7 317 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ctag2Q9D9S4 219 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gtsf1Q9DAN6 167 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Bcl2l10Q9Z0F3 191 aa13.59□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm14412A2ARR7 526 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm5218F6YH22 154 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 CckarO08786 436 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Col9a1Q05722 921 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Vdac1Q60932 296 aaKnown RBP13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Prss33Q80WM7 277 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Il22ra2Q80XF5 230 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Lax1Q8BHB3 407 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 C130073F10RikQ8C4L8 201 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 S1pr5Q91X56 400 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ms4a3Q920C4 213 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Tmem183Q9JJB9 375 aa13.58□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ighv8-2A0A0A6YW58 119 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 AU041133A0A0J9YVH3 498 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Zcchc24B2RVL6 241 aaKnown RBP13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm21746J3QMM6 180 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Serf2P84102 59 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr917Q7TRC3 309 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Epdr1Q99M71 224 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ms4a4cQ9D3F6 226 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Fhl3Q9R059 289 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 DysfQ9ESD7 2090 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr715bE9Q725 315 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ppp1cbP62141 327 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 CiartQ3TQ03 375 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tmprss12Q3V0Q7 336 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cdcp2Q8BQH6 427 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Fam234aQ8C0Z1 555 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr507Q8VG13 316 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cisd2Q9CQB5 135 aaKnown RBP13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Pam16Q9CQV1 125 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Hsd17b6Q9R092 317 aa13.58□□□□□ -0.24
Trim28-201ENSMUST00000005705 Zzef1Q5SSH7 2924 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1496B9EHG2 317 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm20532G3UXR8 106 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 P01790 122 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Timp1P12032 205 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Slc35b1P97858 322 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cnn1Q08091 297 aaKnown RBP13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cib3Q0P523 160 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Npy6rQ61212 371 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ifna16Q810G1 189 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr530Q8VFE8 307 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Vmn1r44Q9EQ47 310 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tbx21Q9JKD8 530 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms