RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
SCARB2-208ENST00000638372 TRGV2A0A075B6R0 118 aa11.57□□□□□ -0.56
SCARB2-208ENST00000638372 LCN12Q6JVE5 192 aa11.57□□□□□ -0.56
SCARB2-208ENST00000638372 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
SCARB2-208ENST00000638372 DKK4Q9UBT3 224 aa11.57□□□□□ -0.56
SCARB2-208ENST00000638372 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 SSC4DQ8WTU2 575 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 D6R8Y8 96 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 SORL1Q92673 2214 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 G3V318 75 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 NDUFS7O75251 213 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 PPBPP02775 128 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 SPRNQ5BIV9 151 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 HIVEP2P31629 2446 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 FNDC10F2Z333 226 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 NBL1P41271 181 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 C3orf36Q3SXR2 165 aa11.56□□□□□ -0.56
SCARB2-208ENST00000638372 DMRTC2Q8IXT2 367 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-208ENST00000638372 EML6Q6ZMW3 1958 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 TRAV9-2A0A087WT02 112 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 ZNF833PQ6ZTB9 187 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 SAMD13Q5VXD3 122 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 TEX36Q5VZQ5 186 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 NXT2Q9NPJ8 142 aaKnown RBP11.55□□□□□ -0.56
SCARB2-208ENST00000638372 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 FCN3O75636 299 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 CIRBPQ14011 172 aaKnown RBP11.55□□□□□ -0.56
SCARB2-208ENST00000638372 ARHGAP21Q5T5U3 1957 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 A0A1B0GUS0 222 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 F2Z2F3 143 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 OVOL1O14753 267 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 NDUFB8O95169 186 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 STHQ8IWL8 128 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 LY96Q9Y6Y9 160 aa11.55□□□□□ -0.56
SCARB2-208ENST00000638372 ADAMTS9Q9P2N4 1935 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-208ENST00000638372 MED12LQ86YW9 2145 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 DSCR9P59020 149 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 OVOL3O00110 214 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 TCF15Q12870 199 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 APOMO95445 188 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 TOMM40O96008 361 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 PSG3Q16557 428 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 NCOR1P1Q9H4R4 102 aa11.54□□□□□ -0.56
SCARB2-208ENST00000638372 PLXNB1O43157 2135 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 SH2D1AO60880 128 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 HTN3P15516 51 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 SHANK2-AS3Q9BTD1 123 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
SCARB2-208ENST00000638372 PFN1P07737 140 aaKnown RBP11.53□□□□□ -0.56
SCARB2-208ENST00000638372 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 MRAP2Q96G30 205 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-208ENST00000638372 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
SCARB2-208ENST00000638372 PEF1Q9UBV8 284 aaKnown RBP11.53□□□□□ -0.56
SCARB2-208ENST00000638372 GGTLC3B5MD39 225 aa11.52□□□□□ -0.56
SCARB2-208ENST00000638372 UBE2E1P51965 193 aa11.52□□□□□ -0.56
SCARB2-208ENST00000638372 SRSF1Q07955 248 aaKnown RBP eCLIP11.52□□□□□ -0.56
SCARB2-208ENST00000638372 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.56
SCARB2-208ENST00000638372 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.56
SCARB2-208ENST00000638372 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.56
SCARB2-208ENST00000638372 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 IGFL2Q6UWQ7 119 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 MCRIP2Q9BUT9 160 aaKnown RBP11.52□□□□□ -0.57
SCARB2-208ENST00000638372 SPRY4Q9C004 299 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 CTSZQ9UBR2 303 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
SCARB2-208ENST00000638372 ERCC8Q13216 396 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 ZNF114Q8NC26 417 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 CHCHD1Q96BP2 118 aaKnown RBP11.51□□□□□ -0.57
SCARB2-208ENST00000638372 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 Q86TA4 180 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 MRPL16Q9NX20 251 aaKnown RBP11.51□□□□□ -0.57
SCARB2-208ENST00000638372 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 MSMBP08118 114 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 SLX1AQ9BQ83 275 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 VCX2Q9H322 139 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 C22orf46C9J442 243 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 LYPD1Q8N2G4 141 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
SCARB2-208ENST00000638372 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms