RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TMEM75Q8N9X5 138 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 EEF1AKMT3Q96AZ1 226 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 H3BUX3 64 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 S100A7P31151 101 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 PRSS22Q9GZN4 317 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 LRRK2Q5S007 2527 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
VPS33B-208ENST00000574755 DIRC3C9JPN6 131 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 COL8A1P27658 744 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 PSG9Q00887 426 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS33B-208ENST00000574755 PSG3Q16557 428 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 TRBV7-1A0A0A6YYK4 115 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 TRBV6-1A0A0K0K1D8 114 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 A8MWL6 223 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 SLC25A16P16260 332 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 PSG8Q9UQ74 426 aa10.91□□□□□ -0.66
VPS33B-208ENST00000574755 NUPR1O60356 82 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 PAX1P15863 534 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 CSN1S1P47710 185 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 CT83Q5H943 113 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-208ENST00000574755 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 ATP5G2Q06055 141 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 BAGE3Q86Y29 109 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 WIPF2Q8TF74 440 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-208ENST00000574755 ASCL2Q99929 193 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 FBN2P35556 2912 aa10.9□□□□□ -0.66
VPS33B-208ENST00000574755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.672e-8■■■■□ 19.9
VPS33B-208ENST00000574755 TRAV20A0A0B4J274 112 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 AVPP01185 164 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 APCSP02743 223 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 JOSD1Q15040 202 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-208ENST00000574755 CENPEQ02224 2701 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 SERF1AO75920 110 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 GATA3P23771 443 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 CRIP2P52943 208 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-208ENST00000574755 C19orf54Q5BKX5 351 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 ZC2HC1AQ96GY0 325 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 NOL4LQ96MY1 436 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-208ENST00000574755 SMAD5-AS1Q9Y6J3 95 aa10.89□□□□□ -0.67
VPS33B-208ENST00000574755 A6NDX4 124 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 TRGV3P03979 118 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 CAMPP49913 170 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 Q0VG73 95 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 SLAQ13239 276 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 F2Z2F3 143 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 GZMBP10144 247 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 SRIP30626 198 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 RAB9AP51151 201 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 RELQ04864 619 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-208ENST00000574755 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
VPS33B-208ENST00000574755 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 BUB3O43684 328 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 IGF1P05019 195 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 LINC00310P59036 64 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 LINC01356Q8N9X3 169 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 OR4B1Q8NGF8 309 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 M0QZK8 103 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 GDF5OSQ5U4N7 250 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 IGFL4Q6B9Z1 124 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 OR5R1Q8NH85 324 aa10.87□□□□□ -0.67
VPS33B-208ENST00000574755 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-208ENST00000574755 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 ZNF785A8K8V0 405 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 ZNF253O75346 499 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-208ENST00000574755 IGHG2P01859 326 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 TPPP2P59282 170 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 RBPMS2Q6ZRY4 209 aaKnown RBP10.86□□□□□ -0.67
VPS33B-208ENST00000574755 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-208ENST00000574755 PRDM13Q9H4Q3 707 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 POLQO75417 2590 aa10.86□□□□□ -0.67
VPS33B-208ENST00000574755 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 A0A1B0GXF2 115 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 FAM231BA6NCW3 169 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 LINC00587B1AMM8 73 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 CHEK1O14757 476 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 ESDP10768 282 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms