RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CTAG1AP78358 180 aa10.44□□□□□ -0.74
LINC00563-201ENST00000566370 FBLN7Q53RD9 439 aa10.44□□□□□ -0.74
LINC00563-201ENST00000566370 METTL26Q96S19 204 aa10.44□□□□□ -0.74
LINC00563-201ENST00000566370 SPTBN1Q01082 2364 aaKnown RBP10.44□□□□□ -0.74
LINC00563-201ENST00000566370 A0A087X0K7 114 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 A0A1B0GXF2 115 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 COX6B1P14854 86 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 BMI1P35226 326 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 AMTP48728 403 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
LINC00563-201ENST00000566370 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 NBEAQ8NFP9 2946 aa10.43□□□□□ -0.74
LINC00563-201ENST00000566370 TRAV8-1A0A0A6YYK1 113 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 HSBP1O75506 76 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 CLEC3BP05452 202 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 DDTP30046 118 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 KIAA1644Q3SXP7 199 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 C9orf152Q5JTZ5 239 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 DMRTA1Q5VZB9 504 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 C17orf77Q96MU5 243 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 BSNQ9UPA5 3926 aa10.42□□□□□ -0.74
LINC00563-201ENST00000566370 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 A8MWP6 167 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
LINC00563-201ENST00000566370 GPX1P07203 203 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 SLAQ13239 276 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
LINC00563-201ENST00000566370 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 TMEM189A5PLL7 270 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 BRI3O95415 125 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 TRGV3P03979 118 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 PAX1P15863 534 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 PMCHP20382 165 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
LINC00563-201ENST00000566370 FAM209BQ5JX69 171 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 C18orf32Q8TCD1 76 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 USMG5Q96IX5 58 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
LINC00563-201ENST00000566370 IGHV3OR16-10A0A075B7F0 116 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 J3QLI3 93 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 CDPF1Q6NVV7 123 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 TMEM219Q86XT9 240 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 MRPL53Q96EL3 112 aaKnown RBP10.4□□□□□ -0.75
LINC00563-201ENST00000566370 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.75
LINC00563-201ENST00000566370 PRO1933Q9H354 126 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 HIF1ANQ9NWT6 349 aa10.4□□□□□ -0.75
LINC00563-201ENST00000566370 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 A0A1W2PS18 150 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 G3V318 75 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 M0R3E3 92 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 NUPR1O60356 82 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 IGF1P05019 195 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
LINC00563-201ENST00000566370 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
LINC00563-201ENST00000566370 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 GTSF1Q8WW33 167 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
LINC00563-201ENST00000566370 CCDC140Q96MF4 163 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
LINC00563-201ENST00000566370 A0A0G2JLM5 398 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 SH2D7A6NKC9 451 aaPredicted RBP10.38□□□□□ -0.75
LINC00563-201ENST00000566370 H3BUX3 64 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 BUB3O43684 328 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 ARL3P36405 182 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 KRTDAPP60985 99 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
LINC00563-201ENST00000566370 LINC01356Q8N9X3 169 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 VAMP8Q9BV40 100 aa10.38□□□□□ -0.75
LINC00563-201ENST00000566370 WNK2Q9Y3S1 2297 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
LINC00563-201ENST00000566370 A6NDX4 124 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 M0R2Z0 102 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 IGHG2P01859 326 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 NTF3P20783 257 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 LINC00310P59036 64 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
LINC00563-201ENST00000566370 LCN12Q6JVE5 192 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 Q6ZWC4 215 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 PRR25Q96S07 402 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
LINC00563-201ENST00000566370 CACNA1AO00555 2505 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 PIEZO1Q92508 2521 aa10.37□□□□□ -0.75
LINC00563-201ENST00000566370 LAMA5O15230 3695 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
LINC00563-201ENST00000566370 F2Z2F3 143 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 NDUFA4O00483 81 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms