RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MYO9BQ13459 2157 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 TRAV3A0A0B4J244 114 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 CCDC160A6NGH7 325 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 RNASE2P10153 161 aaKnown RBP2.04□□□□□ -2.08
TDP1-217ENST00000557782 DNAJB13P59910 316 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 NCS1P62166 190 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 RFX7Q2KHR2 1363 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 TMEM155Q4W5P6 130 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 HSD17B12Q53GQ0 312 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 MORN4Q8NDC4 146 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 OR2T35Q8NGX2 323 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 RETNLBQ9BQ08 111 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 SLC50A1Q9BRV3 221 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 CXCL16Q9H2A7 254 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 PTPN23Q9H3S7 1636 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 DSPPQ9NZW4 1301 aa2.04□□□□□ -2.08
TDP1-217ENST00000557782 SAMD9Q5K651 1589 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 THOC2Q8NI27 1593 aaKnown RBP2.03□□□□□ -2.08
TDP1-217ENST00000557782 EFCAB5A4FU69 1503 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 ARHGEF11O15085 1522 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 DISP2A7MBM2 1401 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 IBA57-AS1B1ANH7 110 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 LY6LH3BQJ8 138 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 K7ERU9 68 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 UQCRQO14949 82 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 OR1I1O60431 355 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 TPT1P13693 172 aaKnown RBP2.03□□□□□ -2.08
TDP1-217ENST00000557782 MIFP14174 115 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 FOXA3P55318 350 aaPredicted RBP2.03□□□□□ -2.08
TDP1-217ENST00000557782 HES1Q14469 280 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 CDK5R1Q15078 307 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 TAF9Q16594 264 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 GLYATL3Q5SZD4 288 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 DIRC1Q969H9 104 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 TP53RKQ96S44 253 aa2.03□□□□□ -2.08
TDP1-217ENST00000557782 SUPT6HQ7KZ85 1726 aaKnown RBP2.03□□□□□ -2.09
TDP1-217ENST00000557782 CROCC2H7BZ55 1655 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 DLC1Q96QB1 1528 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 TCOF1Q13428 1488 aaKnown RBP2.02□□□□□ -2.09
TDP1-217ENST00000557782 LRRC9Q6ZRR7 1453 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 FYCO1Q9BQS8 1478 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 CCNB3Q8WWL7 1395 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 MICAL3Q7RTP6 2002 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 NCKAP5O14513 1909 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 MYLKQ15746 1914 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 MEIKINA0A087WXM9 373 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.02□□□□□ -2.09
TDP1-217ENST00000557782 OR2T8A6NH00 312 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 ZNF705FA8MVS1 300 aaPredicted RBP2.02□□□□□ -2.09
TDP1-217ENST00000557782 UBL3O95164 117 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 APOC1P02654 83 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 GPX1P07203 203 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 TSPAN19P0C672 248 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 KRTAP10-9P60411 292 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 MAXP61244 160 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 SELENOWP63302 87 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 SS18Q15532 418 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 ZNF181Q2M3W8 571 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 RNASE10Q5GAN6 216 aaKnown RBP2.02□□□□□ -2.09
TDP1-217ENST00000557782 CTAGE3PQ8IX95 158 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 Q8IYB0 196 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 POP5Q969H6 163 aaKnown RBP2.02□□□□□ -2.09
TDP1-217ENST00000557782 TIMM21Q9BVV7 248 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 BANF2Q9H503 90 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 TAF9BQ9HBM6 251 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 ERG28Q9UKR5 140 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 TPRKBQ9Y3C4 175 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 LHFPL6Q9Y693 200 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 POLEQ07864 2286 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 E9PCH4 1651 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 KDM6BO15054 1643 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 DNMBPQ6XZF7 1577 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 LAMC3Q9Y6N6 1575 aa2.02□□□□□ -2.09
TDP1-217ENST00000557782 CFTRP13569 1480 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 MYH7P12883 1935 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 KIAA1107Q9UPP5 1409 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 A0A1B0GV90 55 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 M0R233 179 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 HBDP02042 147 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 TCRAP04437 139 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 IGLC6P0CF74 106 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 FABP4P15090 132 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 S100A1P23297 94 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 COPZ1P61923 177 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 RPS25P62851 125 aaKnown RBP2.01□□□□□ -2.09
TDP1-217ENST00000557782 QRFPP83859 136 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 NUMA1Q14980 2115 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 HAGHLQ6PII5 290 aaPredicted RBP2.01□□□□□ -2.09
TDP1-217ENST00000557782 LYPD1Q8N2G4 141 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 HYLS1Q96M11 299 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 LPAR5Q9H1C0 372 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 NIT2Q9NQR4 276 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 SCN3AQ9NY46 2000 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 MYH1P12882 1939 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 EHBP1L1Q8N3D4 1523 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 NCOA2Q15596 1464 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms