RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 PLAC8L1A1L4L8 177 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 H3BRN7 92 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 H7BYZ3 331 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 WRBO00258 174 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 HYPMO75409 117 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 IL5P05113 134 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 OR5G3P0C626 314 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 INAFM2P0DMQ5 153 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 GATA2P23769 480 aaPredicted RBP6.72□□□□□ -1.33
TMEM253-204ENST00000554844 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
TMEM253-204ENST00000554844 DIRAS2Q96HU8 199 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 UHRF2Q96PU4 802 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 UPK3BQ9BT76 320 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 ZNF586Q9NXT0 402 aa6.72□□□□□ -1.33
TMEM253-204ENST00000554844 MRPS16Q9Y3D3 137 aaKnown RBP6.72□□□□□ -1.33
TMEM253-204ENST00000554844 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.33
TMEM253-204ENST00000554844 IGKV1OR2-108A0A075B7D4 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 TRAV8-2A0A0B4J237 113 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 ZNF701M0R085 212 aaPredicted RBP6.71□□□□□ -1.34
TMEM253-204ENST00000554844 CTDSPLO15194 276 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 SYNGR2O43760 224 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 GAGE7O76087 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 SLC25A6P12236 298 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 ANXA7P20073 488 aaKnown RBP6.71□□□□□ -1.34
TMEM253-204ENST00000554844 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 ERVFC1-1P60608 527 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 PSG3Q16557 428 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 SPANXN5Q5MJ07 72 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 CYP2G1PQ6ZSU1 146 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 TMED4Q7Z7H5 227 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 CCDC190Q86UF4 302 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 FRZBQ92765 325 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 RPUSD4Q96CM3 377 aaKnown RBP6.71□□□□□ -1.34
TMEM253-204ENST00000554844 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
TMEM253-204ENST00000554844 RSL24D1Q9UHA3 163 aaKnown RBP6.71□□□□□ -1.34
TMEM253-204ENST00000554844 STRAPQ9Y3F4 350 aaKnown RBP6.71□□□□□ -1.34
TMEM253-204ENST00000554844 ANKRD20A5PA0PJZ0 165 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 H3BNG1 76 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 IFNA5P01569 189 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 LINC00869P0C866 280 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 CXCL3P19876 107 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 SELENOTP62341 195 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 ACOT7LQ6ZUV0 252 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 RNASE8Q8TDE3 154 aaKnown RBP6.7□□□□□ -1.34
TMEM253-204ENST00000554844 NAA50Q9GZZ1 169 aaKnown RBP6.7□□□□□ -1.34
TMEM253-204ENST00000554844 MIXL1Q9H2W2 232 aa6.7□□□□□ -1.34
TMEM253-204ENST00000554844 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 A0A087X0K7 114 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 H3BP45 60 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 CTDSP2O14595 271 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 PITX3O75364 302 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 CXCL2P19875 107 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 LINC00315P59091 139 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 AP3S2P59780 193 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 CTF1Q16619 201 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 ESRGQ1W209 222 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 TMEM128Q5BJH2 165 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 LCN15Q6UWW0 184 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 C17orf77Q96MU5 243 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
TMEM253-204ENST00000554844 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
TMEM253-204ENST00000554844 TRGV2A0A075B6R0 118 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 SIVA1O15304 175 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 LEPP41159 167 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 NFE4Q86UQ8 179 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 ARL6Q9H0F7 186 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 MGAT4CQ9UBM8 478 aa6.68□□□□□ -1.34
TMEM253-204ENST00000554844 PRSS46E5RG02 174 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 J3KRW8 73 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 HOXB5P09067 269 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 PLP1P60201 277 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 PXDC1Q5TGL8 231 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 Q5VSD8 79 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 TMEM182Q6ZP80 229 aaPredicted RBP6.67□□□□□ -1.34
TMEM253-204ENST00000554844 BPIFA4PQ86YQ2 179 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 LRTM2Q8N967 370 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 ARV1Q9H2C2 271 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 TMPRSS5Q9H3S3 457 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 PSENENQ9NZ42 101 aa6.67□□□□□ -1.34
TMEM253-204ENST00000554844 TRAV9-2A0A087WT02 112 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 GOSR2O14653 212 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 NOL3O60936 208 aaKnown RBP6.66□□□□□ -1.34
TMEM253-204ENST00000554844 HOXA5P20719 270 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
TMEM253-204ENST00000554844 GFI1BQ5VTD9 330 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 ZNF546Q86UE3 836 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 LYPD1Q8N2G4 141 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 ZNF680Q8NEM1 530 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 MCFD2Q8NI22 146 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 NPVFQ9HCQ7 196 aa6.66□□□□□ -1.34
TMEM253-204ENST00000554844 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms