RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CCDC140Q96MF4 163 aa13.57□□□□□ -0.24
SNX17-210ENST00000537606 NEU1Q99519 415 aa13.57□□□□□ -0.24
SNX17-210ENST00000537606 TRAV41A0A0B4J266 112 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 M0R3E3 92 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 Q6ZS46 218 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 CIARTQ8N365 385 aaPredicted RBP13.56□□□□□ -0.24
SNX17-210ENST00000537606 GRAMD2BQ96HH9 432 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 NOL4LQ96MY1 436 aaPredicted RBP13.56□□□□□ -0.24
SNX17-210ENST00000537606 LTAP01374 205 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 BLCAPP62952 87 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 SIGLEC15Q6ZMC9 328 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 TCF24Q7RTU0 167 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 PRNTQ86SH4 94 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 BAGE3Q86Y29 109 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 FMC1Q96HJ9 113 aa13.56□□□□□ -0.24
SNX17-210ENST00000537606 HIGD1CA8MV81 97 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 RNF223E7ERA6 249 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 SLC25A16P16260 332 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 TOMM20LQ6UXN7 152 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 TXN2Q99757 166 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 A0A096LNT2 108 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 IGHV3-66A0A0C4DH42 116 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 BMPR1BO00238 502 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 TGFAP01135 160 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 PAX1P15863 534 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 SLAQ13239 276 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 WDR73Q6P4I2 378 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 RABAC1Q9UI14 185 aa13.55□□□□□ -0.24
SNX17-210ENST00000537606 IGHV3OR16-13A0A075B7E8 117 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 IGHV3-74A0A0B4J1X5 117 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 OR5R1Q8NH85 324 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
SNX17-210ENST00000537606 TENM4Q6N022 2769 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 FOSL1P15407 271 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 Q86TA4 180 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 LINC01356Q8N9X3 169 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 TSKUQ8WUA8 353 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
SNX17-210ENST00000537606 APCP25054 2843 aa13.54□□□□□ -0.24
SNX17-210ENST00000537606 A6NDX4 124 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 SRIP30626 198 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 CAMPP49913 170 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 IGHV3-49A0A0A0MS15 119 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
SNX17-210ENST00000537606 MT-ND6P03923 174 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
SNX17-210ENST00000537606 RCHY1Q96PM5 261 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
SNX17-210ENST00000537606 EEF1AKMT3Q96AZ1 226 aa13.52□□□□□ -0.24
SNX17-210ENST00000537606 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.24
SNX17-210ENST00000537606 RNF24Q9Y225 148 aa13.52□□□□□ -0.24
SNX17-210ENST00000537606 SMAD5-AS1Q9Y6J3 95 aa13.52□□□□□ -0.24
SNX17-210ENST00000537606 C19orf71A6NCJ1 209 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 APCSP02743 223 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 TRGV3P03979 118 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 ATP5G2Q06055 141 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 S100A7AQ86SG5 101 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 GTSF1Q8WW33 167 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 ZNF469Q96JG9 3925 aaPredicted RBP13.52□□□□□ -0.25
SNX17-210ENST00000537606 TEX15Q9BXT5 2789 aa13.52□□□□□ -0.25
SNX17-210ENST00000537606 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 SCGB1D1O95968 90 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 P01737 135 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 Q0VG73 95 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 C19orf54Q5BKX5 351 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 DNLZQ5SXM8 178 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 LCNL1Q6ZST4 164 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 Q6ZWC4 215 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 ZNF664Q8N3J9 261 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 PRSS22Q9GZN4 317 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 IQCJQ1A5X6 159 aa13.51□□□□□ -0.25
SNX17-210ENST00000537606 MXRA5Q9NR99 2828 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 ZNF253O75346 499 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 APOHP02749 345 aaPredicted RBP13.5□□□□□ -0.25
SNX17-210ENST00000537606 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
SNX17-210ENST00000537606 HLA-DMBP28068 263 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 DEFB112Q30KQ8 113 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 PGLYRP4Q96LB8 373 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 GATA3P23771 443 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 TPPP2P59282 170 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 HIST2H2BCQ6DN03 193 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
SNX17-210ENST00000537606 SMIM12Q96EX1 92 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 AAMDCQ9H7C9 122 aa13.5□□□□□ -0.25
SNX17-210ENST00000537606 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 CLPSL1A2RUU4 121 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 IGHV4-59P01825 116 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 PKIAP61925 76 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 LYPD1Q8N2G4 141 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 ZC2HC1AQ96GY0 325 aa13.49□□□□□ -0.25
SNX17-210ENST00000537606 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms