RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 C16orf54Q6UWD8 224 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
MKS1-204ENST00000537529 ZC2HC1AQ96GY0 325 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 TRBV7-1A0A0A6YYK4 115 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 CLEC3BP05452 202 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 MSMBP08118 114 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 DSCR9P59020 149 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 GTSF1Q8WW33 167 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 CAMPP49913 170 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 CRIP2P52943 208 aaPredicted RBP12.17□□□□□ -0.46
MKS1-204ENST00000537529 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 PGLYRP4Q96LB8 373 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 NOL4LQ96MY1 436 aaPredicted RBP12.17□□□□□ -0.46
MKS1-204ENST00000537529 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 SCGB1D1O95968 90 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
MKS1-204ENST00000537529 IGHV3-35A0A0C4DH35 117 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
MKS1-204ENST00000537529 IGHV4-38-2P0DP08 117 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 ATP5G2Q06055 141 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 ABCA1O95477 2261 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
MKS1-204ENST00000537529 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
MKS1-204ENST00000537529 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 ATP6V0BQ99437 205 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 PRO1933Q9H354 126 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 TACC2O95359 2948 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 RELQ04864 619 aaPredicted RBP12.15□□□□□ -0.46
MKS1-204ENST00000537529 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
MKS1-204ENST00000537529 Q6ZWC4 215 aa12.15□□□□□ -0.46
MKS1-204ENST00000537529 SSBP4Q9BWG4 385 aaPredicted RBP12.15□□□□□ -0.46
MKS1-204ENST00000537529 A0A087X0K7 114 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 B4DSR2 109 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 CHEK1O14757 476 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 GPX1P07203 203 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 PAX1P15863 534 aa12.14□□□□□ -0.47
MKS1-204ENST00000537529 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
MKS1-204ENST00000537529 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
MKS1-204ENST00000537529 A0A1W2PS18 150 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 A8MWP6 167 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 M0QZK8 103 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
MKS1-204ENST00000537529 SLC25A16P16260 332 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 AMTP48728 403 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
MKS1-204ENST00000537529 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 ASCL2Q99929 193 aa12.13□□□□□ -0.47
MKS1-204ENST00000537529 A6NDX4 124 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 HAX1O00165 279 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 BUB3O43684 328 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 ZNF324O75467 553 aaPredicted RBP12.12□□□□□ -0.47
MKS1-204ENST00000537529 PRB1P04280 392 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
MKS1-204ENST00000537529 GATA3P23771 443 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 DDTP30046 118 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 DEFA6Q01524 100 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 C1orf194Q5T5A4 169 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 C8orf49Q96NF6 230 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 METTL26Q96S19 204 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 HIF1ANQ9NWT6 349 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 H3BUX3 64 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 TRGV3P03979 118 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 IGF1P05019 195 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 COX6B1P14854 86 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 PMCHP20382 165 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 LY6EQ16553 131 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 Q6AWC8 147 aa12.12□□□□□ -0.47
MKS1-204ENST00000537529 ABCA2Q9BZC7 2435 aa12.11□□□□□ -0.47
MKS1-204ENST00000537529 ZNF705FA8MVS1 300 aaPredicted RBP12.11□□□□□ -0.47
MKS1-204ENST00000537529 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
MKS1-204ENST00000537529 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
MKS1-204ENST00000537529 CRIP1P50238 77 aa12.11□□□□□ -0.47
MKS1-204ENST00000537529 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
MKS1-204ENST00000537529 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
MKS1-204ENST00000537529 A0A1B0GUT8 65 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 RIGQ13278 110 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 FAM162BQ5T6X4 162 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 LINC00527Q9UJ94 153 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 A0A1B0GW15 77 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms