RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 FAM219BQ5XKK7 198 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 AMTNQ6UX39 209 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 SRRM4A7MD48 611 aaKnown RBP5.93□□□□□ -1.46
CTNND1-216ENST00000527467 NXPH4O95158 308 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 PAX8Q06710 450 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 TET1Q8NFU7 2136 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 LINC00477Q96M19 166 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 RETNQ9HD89 108 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 FBLN5Q9UBX5 448 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 DOPEY2Q9Y3R5 2298 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 IGHV3-53P01767 116 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 CXCL5P42830 114 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 PRCDQ00LT1 54 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 TP53TG1Q9Y2A0 90 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 HRKO00198 91 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 SIVA1O15304 175 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 EIF4EBP2Q13542 120 aaPredicted RBP5.93□□□□□ -1.46
CTNND1-216ENST00000527467 C9orf139Q6ZV77 190 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 UNC13CQ8NB66 2214 aa5.93□□□□□ -1.46
CTNND1-216ENST00000527467 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 ID3Q02535 119 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 C2orf66Q6UXQ4 117 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 RIF1Q5UIP0 2472 aaKnown RBP5.92□□□□□ -1.46
CTNND1-216ENST00000527467 ATP5G1P05496 136 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 CFC1BP0CG36 223 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 CFC1P0CG37 223 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 VDAC2P45880 294 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-216ENST00000527467 PRSS22Q9GZN4 317 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 GFRA4Q9GZZ7 299 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 THADAQ6YHU6 1953 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 IGHV2-26A0A0B4J1V2 119 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 SMKR1H3BMG3 65 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 GZMMP51124 257 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 NREPQ16612 68 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 IL17RELQ6ZVW7 336 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 MIA3Q5JRA6 1907 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 IGHV2OR16-5A0A0B4J2B6 119 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 PRSS29PA6NIE9 313 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 CD55P08174 381 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 C12orf74Q32Q52 190 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 LINC00312Q9Y6C7 94 aa5.92□□□□□ -1.46
CTNND1-216ENST00000527467 PMS2P5A8MQ11 134 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 IGHV2-70P01814 119 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 LGALS9BQ3B8N2 356 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 SPATA31B1PQ5VZV4 182 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 LGALS9CQ6DKI2 356 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 CCL25O15444 150 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 PRR31Q5SQ13 230 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 PRSS57Q6UWY2 283 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 C8orf86Q6ZUL3 223 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 SPTBP11277 2137 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 LTBP2Q14767 1821 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 SUPT4H1P63272 117 aaKnown RBP5.91□□□□□ -1.46
CTNND1-216ENST00000527467 Q8N8P6 123 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 EP300Q09472 2414 aaPredicted RBP5.91□□□□□ -1.46
CTNND1-216ENST00000527467 TRAV3A0A0B4J244 114 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 TEX48A0A1B0GUV7 120 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 COX6A1P12074 109 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 EXOC3-AS1Q8N2X6 119 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 SLC25A28Q96A46 364 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 WFDC1Q9HC57 220 aa5.91□□□□□ -1.46
CTNND1-216ENST00000527467 TRBV6-7A0A0A0MS04 114 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 H3BQ85 93 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 K7ERJ3 54 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 UBE2AP49459 152 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 TREML4Q6UXN2 200 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 LYPD1Q8N2G4 141 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 RFNGQ9Y644 331 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 CACNA1DQ01668 2161 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 TRBV25-1A0A075B6N4 114 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 H0YIZ8 118 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 YPEL1O60688 119 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 CGB7P0DN87 165 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 SRSF2Q01130 221 aaKnown RBP5.9□□□□□ -1.46
CTNND1-216ENST00000527467 NRN1LQ496H8 165 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 VSIG2Q96IQ7 327 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 YPEL2Q96QA6 119 aa5.9□□□□□ -1.46
CTNND1-216ENST00000527467 A0A087WWL8 130 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 TRBV19A0A075B6N1 114 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 IGHV1OR15-1A0A075B7D0 117 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 SAA2-SAA4A0A096LPE2 208 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 CENPVL1A0A0U1RR11 272 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 SAA2P0DJI9 122 aaPredicted RBP5.9□□□□□ -1.47
CTNND1-216ENST00000527467 IGLL1P15814 213 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 NMSQ5H8A3 153 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 LY6G6FQ5SQ64 297 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 C18orf32Q8TCD1 76 aa5.9□□□□□ -1.47
CTNND1-216ENST00000527467 I3L3M4 83 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 BUB3O43684 328 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 IGKV1D-16P01601 117 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 CLPSP04118 112 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 IFI6P09912 130 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 PDE6HQ13956 83 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 FAM216BQ8N7L0 139 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms