RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 HLA-GP17693 338 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 MYL12AP19105 171 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 CELP19835 753 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 GADD45AP24522 165 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 CXCL5P42830 114 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 TAS2R43P59537 309 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 SNRPD3P62318 126 aaKnown RBP2.05□□□□□ -2.08
PABPC1-206ENST00000518293 FLOT2Q14254 428 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 USF2Q15853 346 aaPredicted RBP2.05□□□□□ -2.08
PABPC1-206ENST00000518293 RAB11BQ15907 218 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM183BQ1AE95 376 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 RBM48Q5RL73 367 aaKnown RBP2.05□□□□□ -2.08
PABPC1-206ENST00000518293 UBE2UQ5VVX9 321 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 KDM4DQ6B0I6 523 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 C6orf201Q7Z4U5 140 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM183AQ8IXX5 376 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 GDPD1Q8N9F7 314 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 UBAC2Q8NBM4 344 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 DEFB104AQ8WTQ1 72 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 CANT1Q8WVQ1 401 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 BORCS5Q969J3 196 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 CCDC124Q96CT7 223 aaKnown RBP2.05□□□□□ -2.08
PABPC1-206ENST00000518293 SMIM19Q96E16 107 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM56Q96MV1 263 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 HSD17B10Q99714 261 aaKnown RBP2.05□□□□□ -2.08
PABPC1-206ENST00000518293 MS4A6AQ9H2W1 248 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 HRASLSQ9HDD0 168 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 SDHAF2Q9NX18 166 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 BABAM2Q9NXR7 383 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 FKBP11Q9NYL4 201 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 ARL2BPQ9Y2Y0 163 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 GOLT1BQ9Y3E0 138 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 S4R3C0 116 aa2.05□□□□□ -2.08
PABPC1-206ENST00000518293 TRAV26-1A0A087WT03 109 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 TRBV6-7A0A0A0MS04 114 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 LYRM9A8MSI8 78 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 H0Y8G0 127 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 L7N2F9 121 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ZNF207O43670 478 aaKnown RBP2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CIB2O75838 187 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ATP5LO75964 103 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 SNAPC5O75971 98 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ATP5G1P05496 136 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CDK1P06493 297 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 SERPINE2P07093 398 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 OR13C7P0DN81 318 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 NQO2P16083 231 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 NPPCP23582 126 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 HTR2CP28335 458 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 NUP62P37198 522 aaPredicted RBP2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ATP5G3P48201 142 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 EMP1P54849 157 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 OR2B8PP59922 312 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 B2MP61769 119 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CATR1Q13166 79 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 RRN3P1Q2M238 152 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 DNAL1Q4LDG9 190 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ACTL10Q5JWF8 245 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 C10orf55Q5SWW7 151 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 SPATA31B1PQ5VZV4 182 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ZNF767PQ75MW2 155 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ZNF546Q86UE3 836 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 PCP2Q8IVA1 136 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 OR1L8Q8NGR8 309 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 ZNRF2Q8NHG8 242 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 UFD1Q92890 307 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 LSM10Q969L4 123 aaKnown RBP2.04□□□□□ -2.08
PABPC1-206ENST00000518293 OR10C1Q96KK4 312 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 METTL26Q96S19 204 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CIB1Q99828 191 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 C7orf50Q9BRJ6 194 aaKnown RBP2.04□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM208Q9BTX3 173 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 HINT2Q9BX68 163 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 GABARAPL3Q9BY60 117 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 CCDC90BQ9GZT6 254 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 FAM107BQ9H098 131 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 GABARAPL1Q9H0R8 117 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 BET1LQ9NYM9 111 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 XCL2Q9UBD3 114 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 AK3Q9UIJ7 227 aa2.04□□□□□ -2.08
PABPC1-206ENST00000518293 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
PABPC1-206ENST00000518293 TRAV8-7A0A075B6U6 113 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 F5H768 121 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 K7EP13 123 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 PEX7O00628 323 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 GSTZ1O43708 216 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 HPRT1P00492 218 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 OXTP01178 125 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 CTSGP08311 255 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 ZNF688P0C7X2 276 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 STAG3L3P0CL85 134 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 S100GP29377 79 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 GTF2A1P52655 376 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 SUB1P53999 127 aaKnown RBP eCLIP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 TAS2R31P59538 309 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 DHRS2Q13268 280 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 OGFRL1Q5TC84 451 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms