RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 NEU1Q99519 415 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 IGLV2-11P01706 119 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 PRNTQ86SH4 94 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 NUP35Q8NFH5 326 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 BORCS7Q96B45 105 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 IGHV4-38-2P0DP08 117 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
NFKB1-205ENST00000505458 RAB4BP61018 213 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 GFI1BQ5VTD9 330 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 CCDC140Q96MF4 163 aa8.81□□□□□ -1
NFKB1-205ENST00000505458 HIGD1CA8MV81 97 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 H3BUX3 64 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 SRSF2Q01130 221 aaKnown RBP8.8□□□□□ -1
NFKB1-205ENST00000505458 SAMD13Q5VXD3 122 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 BRD3OSQ6XYD6 125 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 GNB4Q9HAV0 340 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 TRGV3P03979 118 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 BMI1P35226 326 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 TCL1AP56279 114 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 PYY3Q5JQD4 70 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 BAGE3Q86Y29 109 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 A0A1B0GXF2 115 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 NDUFA4O00483 81 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 BUB3O43684 328 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 PDZD11Q5EBL8 140 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 MRPL54Q6P161 138 aaKnown RBP8.8□□□□□ -1
NFKB1-205ENST00000505458 CLEC19AQ6UXS0 136 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 S4R3C0 116 aa8.8□□□□□ -1
NFKB1-205ENST00000505458 ABCA1O95477 2261 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 A0A1W2PS18 150 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 ZNF785A8K8V0 405 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 G3V318 75 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 IQCJQ1A5X6 159 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 PRSS57Q6UWY2 283 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 C9orf139Q6ZV77 190 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 H3BTX0 84 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 RNF224P0DH78 156 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 RIGQ13278 110 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 TMEM219Q86XT9 240 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 U3KQE9 123 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 CACNA1BQ00975 2339 aa8.79□□□□□ -1
NFKB1-205ENST00000505458 IGHV3-23P01764 117 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 C9orf152Q5JTZ5 239 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 OR2D3Q8NGH3 330 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 A0A096LNT2 108 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.78□□□□□ -1
NFKB1-205ENST00000505458 PCP4L1A6NKN8 68 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 ARL3P36405 182 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 BBC3Q96PG8 261 aaPredicted RBP8.78□□□□□ -1
NFKB1-205ENST00000505458 KALRNO60229 2985 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 IGHV3OR16-10A0A075B7F0 116 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 HAX1O00165 279 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 RAB4AP20338 218 aa8.78□□□□□ -1
NFKB1-205ENST00000505458 KLF5Q13887 457 aaPredicted RBP8.78□□□□□ -1
NFKB1-205ENST00000505458 IGSF10Q6WRI0 2623 aa8.77□□□□□ -1
NFKB1-205ENST00000505458 CHEK1O14757 476 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 PPIFP30405 207 aaKnown RBP8.77□□□□□ -1.01
NFKB1-205ENST00000505458 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 DEFB113Q30KQ7 82 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 GSN-AS1Q9NRJ2 163 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 A8MWP6 167 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 SNRPCP09234 159 aaKnown RBP8.77□□□□□ -1.01
NFKB1-205ENST00000505458 C17orf77Q96MU5 243 aa8.77□□□□□ -1.01
NFKB1-205ENST00000505458 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.76□□□□□ -1.012e-6■■■■■ 31.3
NFKB1-205ENST00000505458 PRB1P04280 392 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 KCNS1Q96KK3 526 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 PPP1R14DQ9NXH3 145 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
NFKB1-205ENST00000505458 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 SAMD10Q9BYL1 202 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 LENEPQ9Y5L5 61 aa8.76□□□□□ -1.01
NFKB1-205ENST00000505458 ZZEF1O43149 2961 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 CLPSL1A2RUU4 121 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SRIP30626 198 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 PKIAP61925 76 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 LY6EQ16553 131 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SIGLECL1Q8N7X8 197 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 PRR25Q96S07 402 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SH2D7A6NKC9 451 aaPredicted RBP8.75□□□□□ -1.01
NFKB1-205ENST00000505458 FSHBP01225 129 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 LCN12Q6JVE5 192 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SMAD5-AS1Q9Y6J3 95 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 LINC01548A6NM66 108 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 M0R3E3 92 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SPINK4O60575 86 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SERF1AO75920 110 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 ASCL2Q99929 193 aa8.75□□□□□ -1.01
NFKB1-205ENST00000505458 SLC35B1P78383 322 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms