RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 IGLV3-9A0A075B6K5 115 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 MEIKINA0A087WXM9 373 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 DLEU1O43261 78 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 PGLYRP1O75594 196 aaPredicted RBP1.78□□□□□ -2.12
CLK1-214ENST00000496205 MT-ND6P03923 174 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 CRYGAP11844 174 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 MIFP14174 115 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 RPS25P62851 125 aaKnown RBP1.78□□□□□ -2.12
CLK1-214ENST00000496205 ZNF791Q3KP31 576 aaPredicted RBP1.78□□□□□ -2.12
CLK1-214ENST00000496205 GLYATL3Q5SZD4 288 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 HAGHLQ6PII5 290 aaPredicted RBP1.78□□□□□ -2.12
CLK1-214ENST00000496205 OR4X2Q8NGF9 303 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 OR10AC1Q8NH08 325 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 ARL11Q969Q4 196 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 TVP23CQ96ET8 276 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 CRCT1Q9UGL9 99 aa1.78□□□□□ -2.12
CLK1-214ENST00000496205 TRPM6Q9BX84 2022 aa1.78□□□□□ -2.13
CLK1-214ENST00000496205 PRDM2Q13029 1718 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 RB1CC1Q8TDY2 1594 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 FAM135AQ9P2D6 1515 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 TMSB15BA0A087X1C1 80 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 CCDC160A6NGH7 325 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 K7ERJ3 54 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 K7ERU9 68 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 OR1I1O60431 355 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 SAA1P0DJI8 122 aaPredicted RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 DEFA4P12838 97 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 TPT1P13693 172 aaKnown RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 MAXP61244 160 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 RRAS2P62070 204 aaPredicted RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 ASB16-AS1Q495Z4 193 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 HSD17B12Q53GQ0 312 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 CTAGE3PQ8IX95 158 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 ZNF418Q8TF45 676 aaPredicted RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 CHCHD1Q96BP2 118 aaKnown RBP1.77□□□□□ -2.13
CLK1-214ENST00000496205 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 CXCL16Q9H2A7 254 aa1.77□□□□□ -2.13
CLK1-214ENST00000496205 EIF4G3O43432 1585 aaKnown RBP1.76□□□□□ -2.13
CLK1-214ENST00000496205 MALRD1Q5VYJ5 2156 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 ZNF518AQ6AHZ1 1483 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 TNS3Q68CZ2 1445 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 A0A1B0GVG6 124 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 ZNF727A8MUV8 499 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 YPEL1O60688 119 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 MT-ND4LP03901 98 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 SHBGP04278 402 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 IGLC6P0CF74 106 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 FABP4P15090 132 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 HIST1H1BP16401 226 aaKnown RBP1.76□□□□□ -2.13
CLK1-214ENST00000496205 KDELR1P24390 212 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 AKR1D1P51857 326 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 COPZ1P61923 177 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 EMX2Q04743 252 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 CDK5R1Q15078 307 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 BRD3OSQ6XYD6 125 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 LINC00301Q8NCQ3 95 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 OR5D14Q8NGL3 314 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 CCL4L1Q8NHW4 92 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 TP53RKQ96S44 253 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 RETNLBQ9BQ08 111 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 LINC00470Q9BZP3 86 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 N4BP2Q86UW6 1770 aaPredicted RBP1.76□□□□□ -2.13
CLK1-214ENST00000496205 SHROOM3Q8TF72 1996 aa1.76□□□□□ -2.13
CLK1-214ENST00000496205 FAM135BQ49AJ0 1406 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 TMEM2Q9UHN6 1383 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FANCMQ8IYD8 2048 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 PNMA8CA0A1B0GUJ8 204 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 A0A1B0GV90 55 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 LOC107986453A0A1B0GWG9 222 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 LINC00587B1AMM8 73 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FAM25AB3EWG3 89 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FAM25CB3EWG5 89 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FAM25GB3EWG6 89 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 E7EQL1 145 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FNDC10F2Z333 226 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 F8W036 122 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 UBL3O95164 117 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 IFNGP01579 166 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 HBDP02042 147 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 HLA-DRB4P13762 266 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 S100PP25815 95 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 ZNF93P35789 620 aaPredicted RBP1.75□□□□□ -2.13
CLK1-214ENST00000496205 FOXA3P55318 350 aaPredicted RBP1.75□□□□□ -2.13
CLK1-214ENST00000496205 ROMO1P60602 79 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 TMEM91Q6ZNR0 172 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 HYLS1Q96M11 299 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 TMEM191AQ9H0A3 160 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 LPAR5Q9H1C0 372 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 BANF2Q9H503 90 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 TPRKBQ9Y3C4 175 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 LHFPL6Q9Y693 200 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 HLA-DRB4X5D2U9 266 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 FRMPD1Q5SYB0 1578 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 CCDC88AQ3V6T2 1871 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 CPAMD8Q8IZJ3 1885 aa1.75□□□□□ -2.13
CLK1-214ENST00000496205 NAIPQ13075 1403 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms