RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TMEM14BQ9NUH8 114 aa12.95□□□□□ -0.34
MCF2L-229ENST00000488765 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 C15orf65H3BRN8 121 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-229ENST00000488765 SCGB2A1O75556 95 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 Q8IYB0 196 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 WDR31Q8NA23 367 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 GAS8-AS1O95177 125 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 TNFRSF1AP19438 455 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 HCP5Q6MZN7 132 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 GCSAMQ8N6F7 178 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 DEFB108BQ8NET1 73 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 OR1L4Q8NGR5 311 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-229ENST00000488765 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 COL5A1P20908 1838 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-229ENST00000488765 AKAP6Q13023 2319 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 H3BVH4 76 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 KIR2DL4Q99706 377 aa12.94□□□□□ -0.34
MCF2L-229ENST00000488765 ATRXP46100 2492 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 ZNF292O60281 2723 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 NDUFS7O75251 213 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 LYZL6O75951 148 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 DUX4L9Q6RFH8 374 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-229ENST00000488765 HIST1H4GQ99525 98 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 CD59P13987 128 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 DEFB124Q8NES8 71 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 PTPRBP23467 1997 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 SPTBN4Q9H254 2564 aa12.93□□□□□ -0.34
MCF2L-229ENST00000488765 IGF2RP11717 2491 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 EVI2AP22794 236 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 Q9H3A6 140 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
MCF2L-229ENST00000488765 CD69Q07108 199 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 C11orf53Q8IXP5 236 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 RPRMLQ8N4K4 120 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 TRGV8A0A0C4DH27 118 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 SIVA1O15304 175 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 PRDX2P32119 198 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 FOXI1Q12951 378 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 CYSLTR1Q9Y271 337 aa12.92□□□□□ -0.34
MCF2L-229ENST00000488765 ABCA4P78363 2273 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 C19orf71A6NCJ1 209 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 E9PLD3 99 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 KLRC4-KLRK1H3BQV0 150 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 SS18L1O75177 396 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-229ENST00000488765 TSPAN13O95857 204 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 PSMB2P49721 201 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 Q6ZUT4 128 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 CEND1Q8N111 149 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
MCF2L-229ENST00000488765 C5orf64Q2M2E5 130 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 C17orf77Q96MU5 243 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 JPT1Q9UK76 154 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
MCF2L-229ENST00000488765 TCRAP04437 139 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 LGALS9BQ3B8N2 356 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 FOXC2Q99958 501 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 LINC00312Q9Y6C7 94 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 TRAV40A0A0B4J280 105 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 TRBV7-9A0A0J9YWB2 115 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 A0A1B0GW15 77 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
MCF2L-229ENST00000488765 KLF14Q8TD94 323 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-229ENST00000488765 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-229ENST00000488765 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-229ENST00000488765 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-229ENST00000488765 HBDP02042 147 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 MEOX1P50221 254 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 CNEP1R1Q8N9A8 125 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 HAX1O00165 279 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 NPYP01303 97 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 CKS2P33552 79 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 TBC1D28Q2M2D7 210 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
MCF2L-229ENST00000488765 SPTBN1Q01082 2364 aaKnown RBP12.89□□□□□ -0.35
MCF2L-229ENST00000488765 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-229ENST00000488765 SPRNQ5BIV9 151 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
MCF2L-229ENST00000488765 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 COL12A1Q99715 3063 aa12.88□□□□□ -0.35
MCF2L-229ENST00000488765 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-229ENST00000488765 LOXL3P58215 753 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms