RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 WSB1Q9Y6I7 421 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 CSMD3Q7Z407 3707 aa4.78□□□□□ -1.64
CLK1-212ENST00000482590 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
CLK1-212ENST00000482590 IGHV7-81A0A0B4J1V7 117 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 TRAV8-6A0A0B4J262 113 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 TEX50A0A1B0GTY4 177 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 OR4C46A6NHA9 309 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 G3V318 75 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 MAS1P04201 325 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 OR13C7P0DN81 318 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 CNTFRP26992 372 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 BLVRBP30043 206 aaPredicted RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 PPP1CCP36873 323 aaKnown RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 RUNX1Q01196 453 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 LRRC36Q1X8D7 754 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 MORN2Q502X0 79 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 CASC10Q5T4H9 136 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 NEGR1Q7Z3B1 354 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 TCTEX1D1Q8N7M0 179 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 OR13C6PQ8NH95 151 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 DCUN1D4Q92564 292 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 FMC1Q96HJ9 113 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 NABP2Q9BQ15 211 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 GINS3Q9BRX5 216 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 OCR1Q9BZK8 76 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 BANF2Q9H503 90 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 GSKIPQ9P0R6 139 aa4.77□□□□□ -1.65
CLK1-212ENST00000482590 PLECQ15149 4684 aaKnown RBP4.77□□□□□ -1.65
CLK1-212ENST00000482590 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 TRAV8-2A0A0B4J237 113 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 PNMA8CA0A1B0GUJ8 204 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 MYL12BO14950 172 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 YPEL1O60688 119 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 PDCD6O75340 191 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 NDUFA3O95167 84 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 SAA2P0DJI9 122 aaPredicted RBP4.76□□□□□ -1.65
CLK1-212ENST00000482590 SPNP16150 400 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 RAB3BP20337 219 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 S100GP29377 79 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 TMEM267Q0VDI3 215 aaPredicted RBP4.76□□□□□ -1.65
CLK1-212ENST00000482590 UNQ5815/PRO19632Q6UWF5 114 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 ZNF833PQ6ZTB9 187 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 SLC35G3Q8N808 338 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 UBAC2Q8NBM4 344 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 MCFD2Q8NI22 146 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 MRPL30Q8TCC3 161 aaKnown RBP4.76□□□□□ -1.65
CLK1-212ENST00000482590 GHSRQ92847 366 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 GALMQ96C23 342 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 ISOC1Q96CN7 298 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 RBMXL1Q96E39 390 aaKnown RBP4.76□□□□□ -1.65
CLK1-212ENST00000482590 YPEL2Q96QA6 119 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 OR4C12Q96R67 309 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 C1QTNF4Q9BXJ3 329 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 ABRACLQ9P1F3 81 aa4.76□□□□□ -1.65
CLK1-212ENST00000482590 IGSF23A1L1A6 192 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 OR5H14A6NHG9 310 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 MPTX1A8MV57 137 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 NDUFS5O43920 106 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 IGHV3-11P01762 117 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 REG1AP05451 166 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 UBBP0CG47 229 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 CXCL3P19876 107 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
CLK1-212ENST00000482590 TPPP2P59282 170 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 NDPQ00604 133 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 HMGN3Q15651 99 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 ZNF660Q6AZW8 331 aaPredicted RBP4.75□□□□□ -1.65
CLK1-212ENST00000482590 MOB1BQ7L9L4 216 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 LYPD6Q86Y78 171 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 SGPP2Q8IWX5 399 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 NKAPP1Q8N9T2 125 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 NPBQ8NG41 125 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 FAM103A1Q9BTL3 118 aaKnown RBP4.75□□□□□ -1.65
CLK1-212ENST00000482590 IFI27L2Q9H2X8 130 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 SPANXA1Q9NS26 97 aa4.75□□□□□ -1.65
CLK1-212ENST00000482590 DNAH1Q9P2D7 4330 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 LCE6AA0A183 80 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 ZNF98A6NK75 572 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 MT-CO2P00403 227 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 CA2P00918 260 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 APOA2P02652 100 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 TRGV3P03979 118 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 HSPB1P04792 205 aaKnown RBP4.74□□□□□ -1.65
CLK1-212ENST00000482590 CXCL2P19875 107 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 H2BFSP57053 126 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 RAB2AP61019 212 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 RPS11P62280 158 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLK1-212ENST00000482590 MRGPRG-AS1Q2M3A8 158 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 RPL39P5Q59GN2 51 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 GLT8D1Q68CQ7 371 aa4.74□□□□□ -1.65
CLK1-212ENST00000482590 ZFAND6Q6FIF0 208 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms