RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ELOBQ15370 118 aa2.55□□□□□ -2
COPA-203ENST00000481040 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
COPA-203ENST00000481040 TAF9BQ9HBM6 251 aa2.55□□□□□ -2
COPA-203ENST00000481040 CBLN4Q9NTU7 201 aa2.55□□□□□ -2
COPA-203ENST00000481040 HSPB8Q9UJY1 196 aa2.55□□□□□ -2
COPA-203ENST00000481040 HIGD1AQ9Y241 93 aa2.55□□□□□ -2
COPA-203ENST00000481040 LY96Q9Y6Y9 160 aa2.55□□□□□ -2
COPA-203ENST00000481040 MICAL3Q7RTP6 2002 aa2.54□□□□□ -2
COPA-203ENST00000481040 PLXNA3P51805 1871 aa2.54□□□□□ -2
COPA-203ENST00000481040 TRAV13-1A0A0B4J241 112 aa2.54□□□□□ -2
COPA-203ENST00000481040 MT-ND6P03923 174 aa2.54□□□□□ -2
COPA-203ENST00000481040 SRP9P49458 86 aaKnown RBP2.54□□□□□ -2
COPA-203ENST00000481040 MORN2Q502X0 79 aa2.54□□□□□ -2
COPA-203ENST00000481040 Q5XG85 94 aa2.54□□□□□ -2
COPA-203ENST00000481040 TCTE3Q8IZS6 198 aa2.54□□□□□ -2
COPA-203ENST00000481040 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
COPA-203ENST00000481040 PCNTO95613 3336 aa2.53□□□□□ -2
COPA-203ENST00000481040 EIF4G3O43432 1585 aaKnown RBP2.53□□□□□ -2
COPA-203ENST00000481040 DISP1Q96F81 1524 aa2.53□□□□□ -2
COPA-203ENST00000481040 MEIKINA0A087WXM9 373 aa2.53□□□□□ -2
COPA-203ENST00000481040 A0A1B0GW64 132 aa2.53□□□□□ -2
COPA-203ENST00000481040 H3BMG7 143 aa2.53□□□□□ -2
COPA-203ENST00000481040 OR2H2O95918 312 aa2.53□□□□□ -2
COPA-203ENST00000481040 KRTAP10-10P60014 251 aa2.53□□□□□ -2
COPA-203ENST00000481040 ROMO1P60602 79 aa2.53□□□□□ -2
COPA-203ENST00000481040 Q1T7F1 81 aa2.53□□□□□ -2
COPA-203ENST00000481040 OR5H6Q8NGV6 325 aa2.53□□□□□ -2
COPA-203ENST00000481040 OR2T35Q8NGX2 323 aa2.53□□□□□ -2
COPA-203ENST00000481040 POP5Q969H6 163 aaKnown RBP2.53□□□□□ -2
COPA-203ENST00000481040 MCEEQ96PE7 176 aa2.53□□□□□ -2
COPA-203ENST00000481040 EP400Q96L91 3159 aa2.53□□□□□ -2
COPA-203ENST00000481040 CFAP43Q8NDM7 1665 aa2.53□□□□□ -2
COPA-203ENST00000481040 RP1P56715 2156 aa2.53□□□□□ -2
COPA-203ENST00000481040 MADDQ8WXG6 1647 aa2.53□□□□□ -2
COPA-203ENST00000481040 ALKQ9UM73 1620 aa2.53□□□□□ -2
COPA-203ENST00000481040 FRMPD1Q5SYB0 1578 aa2.53□□□□□ -2.01
COPA-203ENST00000481040 HMGXB3Q12766 1538 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 MED23Q9ULK4 1368 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 TRBV27A0A0K0K1C4 114 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 B4DSR2 109 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 C17orf112F2Z3M2 114 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 CCDC58Q4VC31 144 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 LINC00311Q8N616 119 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 OR51A4Q8NGJ6 313 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 PRELID3AQ96N28 172 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 COPZ2Q9P299 210 aa2.52□□□□□ -2.01
COPA-203ENST00000481040 MDC1Q14676 2089 aaKnown RBP2.51□□□□□ -2.01
COPA-203ENST00000481040 COL4A4P53420 1690 aaPredicted RBP2.51□□□□□ -2.01
COPA-203ENST00000481040 ICE1Q9Y2F5 2266 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 J3QRE1 110 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 RPL22P35268 128 aaKnown RBP2.51□□□□□ -2.01
COPA-203ENST00000481040 RAB5CP51148 216 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 DEFB113Q30KQ7 82 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 OR4B1Q8NGF8 309 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 OR8J3Q8NGG0 315 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 DIRC1Q969H9 104 aa2.51□□□□□ -2.01
COPA-203ENST00000481040 TCOF1Q13428 1488 aaKnown RBP2.51□□□□□ -2.01
COPA-203ENST00000481040 IGKV2D-26A0A0A0MRZ7 120 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 TRAV12-1A0A0B4J245 112 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 C2orf70A6NJV1 201 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 PAEPP09466 180 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 CDK5R1Q15078 307 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 Q8N814 137 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 NIT2Q9NQR4 276 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
COPA-203ENST00000481040 HEATR5BQ9P2D3 2071 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 TNRC18O15417 2968 aaPredicted RBP2.49□□□□□ -2.01
COPA-203ENST00000481040 SYNJ1O43426 1573 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 DIDO1Q9BTC0 2240 aaKnown RBP2.49□□□□□ -2.01
COPA-203ENST00000481040 STRCP1A6NGW2 1772 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 BCORL1Q5H9F3 1711 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 M0R233 179 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 LYRM1O43325 122 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 CRPP02741 224 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 MT-ND4LP03901 98 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 COX4I1P13073 169 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 CRYGSP22914 178 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 MORN4Q8NDC4 146 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 OR5A2Q8NGI9 324 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 RNASE11Q8TAA1 199 aaKnown RBP2.49□□□□□ -2.01
COPA-203ENST00000481040 NAT14Q8WUY8 206 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 HYLS1Q96M11 299 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 RGS12O14924 1447 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 RTTNQ86VV8 2226 aa2.49□□□□□ -2.01
COPA-203ENST00000481040 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
COPA-203ENST00000481040 DSPPQ9NZW4 1301 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 PREX1Q8TCU6 1659 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 BCL9LQ86UU0 1499 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 CDK12Q9NYV4 1490 aaPredicted RBP2.48□□□□□ -2.01
COPA-203ENST00000481040 OR2T8A6NH00 312 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 NDUFA2O43678 99 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 MPC1LP0DKB6 136 aa2.48□□□□□ -2.01
COPA-203ENST00000481040 FOXA3P55318 350 aaPredicted RBP2.48□□□□□ -2.01
COPA-203ENST00000481040 MRPS36P82909 103 aaKnown RBP2.48□□□□□ -2.01
COPA-203ENST00000481040 HIST1H1AQ02539 215 aaPredicted RBP2.48□□□□□ -2.01
COPA-203ENST00000481040 OR5D14Q8NGL3 314 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms