RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 C1orf134Q5TEV5 83 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 PHF5AQ7RTV0 110 aaKnown RBP1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 TEX29Q8N6K0 151 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 CARD19Q96LW7 228 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 PRELID3AQ96N28 172 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 GGACTQ9BVM4 153 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 LRTM1Q9HBL6 345 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 CDC42SE1Q9NRR8 79 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 SPANXCQ9NY87 97 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 DOCK10Q96BY6 2186 aa1.76□□□□□ -2.13
NECTIN3-204ENST00000478327 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 A0A096LPI6 279 aa1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 IGHV1-58A0A0C4DH39 117 aa1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 H7BYZ3 331 aa1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 NBEAP1P0C6P0 100 aa1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 RNASE3P12724 160 aaKnown RBP1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 RPL7P18124 248 aaKnown RBP1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 ORMDL1Q9P0S3 153 aa1.75□□□□□ -2.13
NECTIN3-204ENST00000478327 TNS3Q68CZ2 1445 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 TRAPPC8Q9Y2L5 1435 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 TRAV27A0A087WT01 109 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 TRBV6-7A0A0A0MS04 114 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 TRAV13-1A0A0B4J241 112 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 F8W1H4 67 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 DNAL4O96015 105 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 CXCL8P10145 99 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 TPT1P13693 172 aaKnown RBP1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 SRP9P49458 86 aaKnown RBP1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 LSM3P62310 102 aaKnown RBP1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 ARPINQ7Z6K5 226 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 ZC2HC1AQ96GY0 325 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 CYSTM1Q9H1C7 97 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 ANAPC1Q9H1A4 1944 aa1.74□□□□□ -2.13
NECTIN3-204ENST00000478327 SBF1O95248 1867 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 H3BMG7 143 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 H3BRM9 83 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 GEMIN2O14893 280 aaKnown RBP1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 HCRTO43612 131 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 FABP4P15090 132 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 CMPK1P30085 196 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 CCDC153Q494R4 210 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 OR8I2Q8N0Y5 310 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 Q8N814 137 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 TMEM229BQ8NBD8 167 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 OR5AK2Q8NH90 309 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 MRPL57Q9BQC6 102 aaKnown RBP1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 COL5A3P25940 1745 aaPredicted RBP1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 BCL9O00512 1426 aa1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 ZCCHC11Q5TAX3 1644 aaKnown RBP1.73□□□□□ -2.13
NECTIN3-204ENST00000478327 RTL9Q8NET4 1388 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 BAHCC1Q9P281 2608 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 DOCK4Q8N1I0 1966 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 DEGS1O15121 323 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 SCGB1A1P11684 91 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 MPV17LQ2QL34 196 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 C10orf105Q8TEF2 133 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 AP1S3Q96PC3 154 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 TMEM138Q9NPI0 162 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 CALML5Q9NZT1 146 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 CACNA1GO43497 2377 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 STRCQ7RTU9 1775 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 NUMA1Q14980 2115 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 DENND4CQ5VZ89 1909 aa1.72□□□□□ -2.13
NECTIN3-204ENST00000478327 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 B4DSR2 109 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 CCL16O15467 120 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 DPM2O94777 84 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 MAXP61244 160 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 CNBPP62633 177 aaKnown RBP1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 OR5AS1Q8N127 324 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 TMEM14CQ9P0S9 112 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 MYH2Q9UKX2 1941 aa1.71□□□□□ -2.14
NECTIN3-204ENST00000478327 SCN8AQ9UQD0 1980 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 A2MP01023 1474 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 UBR2Q8IWV8 1755 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 MYH7BA7E2Y1 1941 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 TRBV27A0A0K0K1C4 114 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 LOC107984640A0A0U1RRK4 108 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 M0QZK8 103 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 IGLV1-51P01701 117 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 DBIP07108 87 aaKnown RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 RPS3P23396 243 aaKnown RBP eCLIP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 GTF2A1P52655 376 aaPredicted RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 DIAPH2-AS1Q14236 149 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 TMEM14EPQ6UXP3 125 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 ZNF833PQ6ZTB9 187 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 OR51A4Q8NGJ6 313 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 CCDC88CQ9P219 2028 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 CHCHD2Q9Y6H1 151 aaPredicted RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 ZFHX2Q9C0A1 2572 aaPredicted RBP1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 NUP98P52948 1817 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 PIK3C2AO00443 1686 aa1.7□□□□□ -2.14
NECTIN3-204ENST00000478327 TRAV36DV7A0A075B6V5 113 aa1.69□□□□□ -2.14
NECTIN3-204ENST00000478327 TRBV6-4A0A1B0GX49 114 aa1.69□□□□□ -2.14
NECTIN3-204ENST00000478327 C9orf170A2RU37 121 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms