RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PRO0461Q9UI25 63 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 DNAJC15Q9Y5T4 150 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 ARHGAP21Q5T5U3 1957 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 SCN1AP35498 2009 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 NISCHQ9Y2I1 1504 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 AKAP12Q02952 1782 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 IGLV4-69A0A075B6H9 119 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
NUP58-209ENST00000476553 TMEM235A6NFC5 223 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 H3BPC8 53 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 PANO1I0J062 215 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 TNFP01375 233 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 FUSP35637 526 aaKnown RBP eCLIP3.59□□□□□ -1.83
NUP58-209ENST00000476553 FOXF1Q12946 379 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 KLRD1Q13241 179 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 EBI3Q14213 229 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 GKN2Q86XP6 184 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 FAM216BQ8N7L0 139 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 KLF14Q8TD94 323 aaPredicted RBP3.59□□□□□ -1.83
NUP58-209ENST00000476553 FGF13Q92913 245 aa3.59□□□□□ -1.83
NUP58-209ENST00000476553 MRPS24Q96EL2 167 aaKnown RBP3.59□□□□□ -1.83
NUP58-209ENST00000476553 PLXNB1O43157 2135 aa3.59□□□□□ -1.84
NUP58-209ENST00000476553 COL1A1P02452 1464 aaPredicted RBP3.59□□□□□ -1.84
NUP58-209ENST00000476553 ZNF407Q9C0G0 2248 aa3.59□□□□□ -1.84
NUP58-209ENST00000476553 M0R129 80 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 SYNGR2O43760 224 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 IL4P05112 153 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 COX6A1P12074 109 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 TPT1P13693 172 aaKnown RBP3.58□□□□□ -1.84
NUP58-209ENST00000476553 COL8A2P25067 703 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
NUP58-209ENST00000476553 CDK5R1Q15078 307 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 LGALSLQ3ZCW2 172 aaPredicted RBP3.58□□□□□ -1.84
NUP58-209ENST00000476553 KCNRGQ8N5I3 272 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 SLC35B3Q9H1N7 401 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 RPRMQ9NS64 109 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 FAM215AQ9Y5M1 114 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 KIAA1107Q9UPP5 1409 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 CECR2Q9BXF3 1484 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 TRPM3Q9HCF6 1732 aaPredicted RBP3.58□□□□□ -1.84
NUP58-209ENST00000476553 MYH6P13533 1939 aa3.58□□□□□ -1.84
NUP58-209ENST00000476553 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 TRAV12-2A0A075B6T6 113 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 TIMM17BO60830 172 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 RIC1Q4ADV7 1423 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 COL5A1-AS1Q5SY13 56 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 FRMPD1Q5SYB0 1578 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 AQP3Q92482 292 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 PKMYT1Q99640 499 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 ANAPC1Q9H1A4 1944 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 SAR1AQ9NR31 198 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 NHP2Q9NX24 153 aaKnown RBP3.57□□□□□ -1.84
NUP58-209ENST00000476553 TAS2R8Q9NYW2 309 aa3.57□□□□□ -1.84
NUP58-209ENST00000476553 NYNRINQ9P2P1 1898 aaKnown RBP3.57□□□□□ -1.84
NUP58-209ENST00000476553 MYH9P35579 1960 aaKnown RBP3.56□□□□□ -1.84
NUP58-209ENST00000476553 PTPRSQ13332 1948 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 C16orf90A8MZG2 172 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 ZNF705BP0CI00 300 aaPredicted RBP3.56□□□□□ -1.84
NUP58-209ENST00000476553 CATR1Q13166 79 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 CLLU1Q5K131 121 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 Q6ZR54 194 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 C10orf111Q8N326 155 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 LINC00467Q9BRT7 94 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 BCL2L10Q9HD36 194 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 LSM2Q9Y333 95 aaKnown RBP3.56□□□□□ -1.84
NUP58-209ENST00000476553 TIMM9Q9Y5J7 89 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 ABCA7Q8IZY2 2146 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 CCDC88AQ3V6T2 1871 aa3.56□□□□□ -1.84
NUP58-209ENST00000476553 TRGV5A0A0B4J1U4 118 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 CD3DP04234 171 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 CCL4P13236 92 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 FABP4P15090 132 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 FXYD2P54710 66 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 ZNF79Q15937 498 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 CCL4L1Q8NHW4 92 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
NUP58-209ENST00000476553 NAA60Q9H7X0 242 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 METTL1Q9UBP6 276 aaKnown RBP3.55□□□□□ -1.84
NUP58-209ENST00000476553 COL27A1Q8IZC6 1860 aaPredicted RBP3.55□□□□□ -1.84
NUP58-209ENST00000476553 KIF26AQ9ULI4 1882 aaPredicted RBP3.55□□□□□ -1.84
NUP58-209ENST00000476553 POLEQ07864 2286 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 CABIN1Q9Y6J0 2220 aa3.55□□□□□ -1.84
NUP58-209ENST00000476553 MAPKBP1O60336 1514 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 TRBV10-2A0A0K0K1G8 114 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 OR1I1O60431 355 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 WISP3O95389 354 aaPredicted RBP3.54□□□□□ -1.84
NUP58-209ENST00000476553 RBP4P02753 201 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 CD14P08571 375 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 SAA1P0DJI8 122 aaPredicted RBP3.54□□□□□ -1.84
NUP58-209ENST00000476553 CRYGAP11844 174 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
NUP58-209ENST00000476553 S100A10P60903 97 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 BLCAPP62952 87 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 Q8NAQ8 132 aa3.54□□□□□ -1.84
NUP58-209ENST00000476553 QRICH2Q9H0J4 1663 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms