RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NDUFB8O95169 186 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 OR5AL1P0C617 328 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
SMC4-212ENST00000470240 BMI1P35226 326 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 CDKN1AP38936 164 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 UNQ5815/PRO19632Q6UWF5 114 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 SIGLEC15Q6ZMC9 328 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 Q8N6K4 173 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 LINC00469Q8N7U9 141 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 FAM110DQ8TAY7 271 aaPredicted RBP6.28□□□□□ -1.4
SMC4-212ENST00000470240 EEF1AKMT3Q96AZ1 226 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 ZNF414Q96IQ9 312 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 SIRPDQ9H106 197 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 UQCR10Q9UDW1 63 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 CEP250Q9BV73 2442 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 VPS13AQ96RL7 3174 aa6.28□□□□□ -1.4
SMC4-212ENST00000470240 TMEM189A5PLL7 270 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 OR2T8A6NH00 312 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 CD24P25063 80 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 RELQ04864 619 aaPredicted RBP6.27□□□□□ -1.41
SMC4-212ENST00000470240 RUSC1-AS1Q66K80 236 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 RCHY1Q96PM5 261 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 PIMREGQ9BSJ6 248 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
SMC4-212ENST00000470240 COL6A3P12111 3177 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 LOC102724200A0A096LPH7 203 aaPredicted RBP6.26□□□□□ -1.41
SMC4-212ENST00000470240 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 TRBV7-1A0A0A6YYK4 115 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 IGHV7-81A0A0B4J1V7 117 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 A0A1B0GV90 55 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 ZNF785A8K8V0 405 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 NPFFO15130 113 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 FOXA3P55318 350 aaPredicted RBP6.26□□□□□ -1.41
SMC4-212ENST00000470240 CDSNQ15517 529 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 ECSCRQ19T08 205 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 SPATA45Q537H7 98 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 LDLRAD2Q5SZI1 272 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 TMEM70Q9BUB7 260 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 WDFY3Q8IZQ1 3526 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 ROS1P08922 2347 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 PTPRQQ9UMZ3 2332 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 MUC6Q6W4X9 2439 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 GVINP1Q7Z2Y8 2422 aa6.26□□□□□ -1.41
SMC4-212ENST00000470240 SH2D7A6NKC9 451 aaPredicted RBP6.25□□□□□ -1.41
SMC4-212ENST00000470240 IGLV2-11P01706 119 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 SAA4P35542 130 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 HNRNPA3P51991 378 aaKnown RBP6.25□□□□□ -1.41
SMC4-212ENST00000470240 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 KLF17Q5JT82 389 aaPredicted RBP6.25□□□□□ -1.41
SMC4-212ENST00000470240 GDF5OSQ5U4N7 250 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 ASPHD1Q5U4P2 390 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 C16orf54Q6UWD8 224 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 FA2HQ7L5A8 372 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 NIT1Q86X76 327 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 Q8N9W7 124 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 ITLN2Q8WWU7 325 aaPredicted RBP6.25□□□□□ -1.41
SMC4-212ENST00000470240 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 METTL26Q96S19 204 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 ATP6V0BQ99437 205 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 TPPP3Q9BW30 176 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 MAP1LC3CQ9BXW4 147 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 CLEC5AQ9NY25 188 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 MOB4Q9Y3A3 225 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 S4R3C0 116 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 PTPRZ1P23471 2315 aaPredicted RBP6.25□□□□□ -1.41
SMC4-212ENST00000470240 PLXNB1O43157 2135 aa6.25□□□□□ -1.41
SMC4-212ENST00000470240 FREM2Q5SZK8 3169 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 TRAV9-2A0A087WT02 112 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 A0A087X0K7 114 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
SMC4-212ENST00000470240 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 LINC00614P0C842 121 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
SMC4-212ENST00000470240 GPR183P32249 361 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
SMC4-212ENST00000470240 RHOGP84095 191 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 LY6DQ14210 128 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 C15orf32Q32M92 178 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 UNQ6494/PRO21346Q6UXR6 183 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 LINC00322Q6ZN03 302 aaPredicted RBP6.24□□□□□ -1.41
SMC4-212ENST00000470240 Q6ZN92 141 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 SNHG12Q9BXW3 62 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 BPESC1Q9GZL8 116 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 PRORYQ9H606 182 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 ZFHX2Q9C0A1 2572 aaPredicted RBP6.24□□□□□ -1.41
SMC4-212ENST00000470240 FRYLO94915 3013 aa6.24□□□□□ -1.41
SMC4-212ENST00000470240 CFAP54Q96N23 3096 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 RBAKDNA6NC62 111 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 TMEM8BA6NDV4 472 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 FAM223BA6NKX1 122 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 NDUFS8O00217 210 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms