RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 HLA-DQA1P01909 254 aa13.19□□□□□ -0.3
NUP58-208ENST00000466694 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
NUP58-208ENST00000466694 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
NUP58-208ENST00000466694 NUP35Q8NFH5 326 aa13.19□□□□□ -0.3
NUP58-208ENST00000466694 EEF1AKMT3Q96AZ1 226 aa13.19□□□□□ -0.3
NUP58-208ENST00000466694 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
NUP58-208ENST00000466694 P01737 135 aa13.18□□□□□ -0.3
NUP58-208ENST00000466694 CRISP2P16562 243 aa13.18□□□□□ -0.3
NUP58-208ENST00000466694 PSG9Q00887 426 aa13.18□□□□□ -0.3
NUP58-208ENST00000466694 LINC00322Q6ZN03 302 aaPredicted RBP13.18□□□□□ -0.3
NUP58-208ENST00000466694 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
NUP58-208ENST00000466694 AAMDCQ9H7C9 122 aa13.18□□□□□ -0.3
NUP58-208ENST00000466694 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
NUP58-208ENST00000466694 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 DIRC3C9JPN6 131 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 CLEC3BP05452 202 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
NUP58-208ENST00000466694 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 NEU1Q99519 415 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
NUP58-208ENST00000466694 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 CELSR1Q9NYQ6 3014 aa13.17□□□□□ -0.3
NUP58-208ENST00000466694 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 A8MWL6 223 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 GATA3P23771 443 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 RAB4BP61018 213 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 Q0VG73 95 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 PSG3Q16557 428 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 TMEM256Q8N2U0 113 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 ATP5L2Q7Z4Y8 100 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
NUP58-208ENST00000466694 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 PSG8Q9UQ74 426 aa13.16□□□□□ -0.3
NUP58-208ENST00000466694 A6NDX4 124 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 ZNF253O75346 499 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 RAB9AP51151 201 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
NUP58-208ENST00000466694 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
NUP58-208ENST00000466694 FAM223BA6NKX1 122 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 CSN1S1P47710 185 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 ATP5G2Q06055 141 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 FAM223AQ8IWN6 122 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 CR1P17927 2039 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 H3BUX3 64 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 M0R3E3 92 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 IGF1P05019 195 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 ESDP10768 282 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
NUP58-208ENST00000466694 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
NUP58-208ENST00000466694 CSMD1Q96PZ7 3565 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 M0QZK8 103 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 NUPR1O60356 82 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 APCSP02743 223 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 C9orf152Q5JTZ5 239 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
NUP58-208ENST00000466694 A0A1B0GXF2 115 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
NUP58-208ENST00000466694 LY6EQ16553 131 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 LINC01356Q8N9X3 169 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 A0A087X0K7 114 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 AVPP01185 164 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 IGHG2P01859 326 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 LINC00310P59036 64 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
NUP58-208ENST00000466694 CLPSL1A2RUU4 121 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 BUB3O43684 328 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 SERF1AO75920 110 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 BRI3O95415 125 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 GZMBP10144 247 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 LOXL1Q08397 574 aaPredicted RBP13.11□□□□□ -0.31
NUP58-208ENST00000466694 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms