RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 APOHP02749 345 aaPredicted RBP8.17□□□□□ -1.1
CD44-210ENST00000434472 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
CD44-210ENST00000434472 ZFP36P26651 326 aaKnown RBP8.17□□□□□ -1.1
CD44-210ENST00000434472 RAB9AP51151 201 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
CD44-210ENST00000434472 NDPQ00604 133 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 NHLH1Q02575 133 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 COX8CQ7Z4L0 72 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 Q8N9W7 124 aa8.17□□□□□ -1.1
CD44-210ENST00000434472 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 LINC00614P0C842 121 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 EGR2P11161 476 aaPredicted RBP8.16□□□□□ -1.1
CD44-210ENST00000434472 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 UBTD1Q9HAC8 227 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 S4R3C0 116 aa8.16□□□□□ -1.1
CD44-210ENST00000434472 ANKHD1Q8IWZ3 2542 aaKnown RBP8.15□□□□□ -1.1
CD44-210ENST00000434472 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 TMEM189A5PLL7 270 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 C2orf70A6NJV1 201 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 CTSGP08311 255 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 URB1-AS1Q96HZ7 61 aa8.15□□□□□ -1.1
CD44-210ENST00000434472 PTPRZ1P23471 2315 aaPredicted RBP8.15□□□□□ -1.11
CD44-210ENST00000434472 ZNF785A8K8V0 405 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 BMI1P35226 326 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 SRSF2Q01130 221 aaKnown RBP8.14□□□□□ -1.11
CD44-210ENST00000434472 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 PIEZO2Q9H5I5 2752 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
CD44-210ENST00000434472 A0A087X0K7 114 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 IGHV1-24A0A0C4DH33 117 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 OR2T8A6NH00 312 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 M0R3E3 92 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 OVOL3O00110 214 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 ARMS2P0C7Q2 107 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 CRIP1P50238 77 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
CD44-210ENST00000434472 UNQ5815/PRO19632Q6UWF5 114 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 Q6ZN92 141 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 ZNF493Q6ZR52 646 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 ZNF502Q8TBZ5 544 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
CD44-210ENST00000434472 CFAP47Q6ZTR5 3102 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 TLN1Q9Y490 2541 aaKnown RBP8.13□□□□□ -1.11
CD44-210ENST00000434472 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
CD44-210ENST00000434472 SH2D1AO60880 128 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 GOSR1O95249 250 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 IGHV3-23P01764 117 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 LMO4P61968 165 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 RELQ04864 619 aaPredicted RBP8.13□□□□□ -1.11
CD44-210ENST00000434472 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 FAM120AOSQ5T036 256 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 C8orf49Q96NF6 230 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 ATP6V0BQ99437 205 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 TMEM191AQ9H0A3 160 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 BOD1L1Q8NFC6 3051 aa8.13□□□□□ -1.11
CD44-210ENST00000434472 A0A1W2PPR1 153 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 NPFFO15130 113 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 LCN12Q6JVE5 192 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 AJUBAQ96IF1 538 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 PRR25Q96S07 402 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 SLC50A1Q9BRV3 221 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 PRORYQ9H606 182 aa8.12□□□□□ -1.11
CD44-210ENST00000434472 MRPS16Q9Y3D3 137 aaKnown RBP8.12□□□□□ -1.11
CD44-210ENST00000434472 RBAKDNA6NC62 111 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 SYS1-DBNDD2H3BUS1 97 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 NDUFS7O75251 213 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 SAA4P35542 130 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 RHOGP84095 191 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 ECSCRQ19T08 205 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 FA2HQ7L5A8 372 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 BCL6BQ8N143 479 aaPredicted RBP8.11□□□□□ -1.11
CD44-210ENST00000434472 ITLN2Q8WWU7 325 aaPredicted RBP8.11□□□□□ -1.11
CD44-210ENST00000434472 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 CLEC5AQ9NY25 188 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 IGKV2-40A0A087WW87 121 aaPredicted RBP8.11□□□□□ -1.11
CD44-210ENST00000434472 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 CENPVL3A0A0U1RRI6 287 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 OR4C46A6NHA9 309 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 ATP6V0E1O15342 81 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 IGKV2D-40P01614 121 aaPredicted RBP8.11□□□□□ -1.11
CD44-210ENST00000434472 GPR183P32249 361 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 PRSS3P2Q8NHM4 247 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 U3KQK5 164 aa8.11□□□□□ -1.11
CD44-210ENST00000434472 HSBP1L1C9JCN9 74 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 GAGE1Q13065 139 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 BATFQ16520 125 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
CD44-210ENST00000434472 Q71RC1 249 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms