RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 H3BTX0 84 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 P01737 135 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 ESDP10768 282 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 TCL1AP56279 114 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 PRSS57Q6UWY2 283 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 ATP5L2Q7Z4Y8 100 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 ATP6V0BQ99437 205 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 FOXC2Q99958 501 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 HSPB9Q9BQS6 159 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 GFRA4Q9GZZ7 299 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 RPP21Q9H633 154 aaKnown RBP10.02□□□□□ -0.81
DDX56-204ENST00000431640 SOX21Q9Y651 276 aaPredicted RBP10.02□□□□□ -0.81
DDX56-204ENST00000431640 S4R3C0 116 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 MED13LQ71F56 2210 aa10.02□□□□□ -0.81
DDX56-204ENST00000431640 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 FBLL1A6NHQ2 334 aaKnown RBP10.01□□□□□ -0.81
DDX56-204ENST00000431640 BMPR1BO00238 502 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 ATP6V0E1O15342 81 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 CSN1S1P47710 185 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 RAB4BP61018 213 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 OR10J3Q5JRS4 329 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 SIGLEC15Q6ZMC9 328 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 OR4B1Q8NGF8 309 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 MOB4Q9Y3A3 225 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 OR2T8A6NH00 312 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 SPINK4O60575 86 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 APCSP02743 223 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
DDX56-204ENST00000431640 ECSCRQ19T08 205 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 MRPL54Q6P161 138 aaKnown RBP10.01□□□□□ -0.81
DDX56-204ENST00000431640 GOLT1AQ6ZVE7 132 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 Q86TA4 180 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 BAGE3Q86Y29 109 aa10.01□□□□□ -0.81
DDX56-204ENST00000431640 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
DDX56-204ENST00000431640 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
DDX56-204ENST00000431640 DIRC3C9JPN6 131 aa10□□□□□ -0.81
DDX56-204ENST00000431640 TPPP2P59282 170 aa10□□□□□ -0.81
DDX56-204ENST00000431640 RHOGP84095 191 aa10□□□□□ -0.81
DDX56-204ENST00000431640 C15orf32Q32M92 178 aa10□□□□□ -0.81
DDX56-204ENST00000431640 PRNTQ86SH4 94 aa10□□□□□ -0.81
DDX56-204ENST00000431640 TMEM256Q8N2U0 113 aa10□□□□□ -0.81
DDX56-204ENST00000431640 EEF1AKMT3Q96AZ1 226 aa10□□□□□ -0.81
DDX56-204ENST00000431640 SGK494Q96LW2 274 aa10□□□□□ -0.81
DDX56-204ENST00000431640 FLNAP21333 2647 aaKnown RBP9.99□□□□□ -0.81
DDX56-204ENST00000431640 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 ZNF253O75346 499 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
DDX56-204ENST00000431640 IGLV2-11P01706 119 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 IGHV4-31P0DP07 118 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 GATA3P23771 443 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 CRIP2P52943 208 aaPredicted RBP9.99□□□□□ -0.81
DDX56-204ENST00000431640 SLC35B1P78383 322 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 PSG3Q16557 428 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 C17orf77Q96MU5 243 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 NEU1Q99519 415 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 PSG8Q9UQ74 426 aa9.99□□□□□ -0.81
DDX56-204ENST00000431640 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 B4DSR2 109 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 IGHV3-23P01764 117 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 CLEC3BP05452 202 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 MSMBP08118 114 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 FRMD6-AS1P0C7T7 363 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 GZMBP10144 247 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 KRTAP1-1Q07627 177 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 ZFHX3Q15911 3703 aa9.98□□□□□ -0.81
DDX56-204ENST00000431640 MYO9AB2RTY4 2548 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 FAM223BA6NKX1 122 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 M0QZK8 103 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 IQCJQ1A5X6 159 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 FAM223AQ8IWN6 122 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.812e-7■■■□□ 17.6
DDX56-204ENST00000431640 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 TRAV40A0A0B4J280 105 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 BRI3O95415 125 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 GPR183P32249 361 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 FOXA3P55318 350 aaPredicted RBP9.97□□□□□ -0.81
DDX56-204ENST00000431640 PKIAP61925 76 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 RELQ04864 619 aaPredicted RBP9.97□□□□□ -0.81
DDX56-204ENST00000431640 SAPCD1Q5SSQ6 148 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 TOMM20LQ6UXN7 152 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 LINC00322Q6ZN03 302 aaPredicted RBP9.97□□□□□ -0.81
DDX56-204ENST00000431640 RBPMS2Q6ZRY4 209 aaKnown RBP9.97□□□□□ -0.81
DDX56-204ENST00000431640 MS4A10Q96PG2 267 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 PRDM13Q9H4Q3 707 aa9.97□□□□□ -0.81
DDX56-204ENST00000431640 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 A0A1B0GXF2 115 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 G3V318 75 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 NUPR1O60356 82 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 SERF1AO75920 110 aa9.96□□□□□ -0.82
DDX56-204ENST00000431640 AVPP01185 164 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 551 ms