RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NAA50Q9GZZ1 169 aaKnown RBP6.94□□□□□ -1.3
MDC1-202ENST00000416571 MIXL1Q9H2W2 232 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 RABL2AQ9UBK7 228 aaPredicted RBP6.94□□□□□ -1.3
MDC1-202ENST00000416571 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 H3BNG1 76 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 CTDSPLO15194 276 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 SYNGR2O43760 224 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 PITX3O75364 302 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 LINC00315P59091 139 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 ERVFC1-1P60608 527 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 CTF1Q16619 201 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 SPANXN5Q5MJ07 72 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 ACOT7LQ6ZUV0 252 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 CCDC190Q86UF4 302 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 RPUSD4Q96CM3 377 aaKnown RBP6.93□□□□□ -1.3
MDC1-202ENST00000416571 DIRAS2Q96HU8 199 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 RNF24Q9Y225 148 aa6.93□□□□□ -1.3
MDC1-202ENST00000416571 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
MDC1-202ENST00000416571 A0A087X0K7 114 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 ANKRD20A5PA0PJZ0 165 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 H3BP45 60 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 CTDSP2O14595 271 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 HYPMO75409 117 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 LINC00869P0C866 280 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 PRB4P10163 310 aaPredicted RBP6.92□□□□□ -1.3
MDC1-202ENST00000416571 SLC25A6P12236 298 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
MDC1-202ENST00000416571 HOXA5P20719 270 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 VAMP1P23763 118 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 Q5VSD8 79 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 CYP2G1PQ6ZSU1 146 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
MDC1-202ENST00000416571 STRAPQ9Y3F4 350 aaKnown RBP6.92□□□□□ -1.3
MDC1-202ENST00000416571 SIVA1O15304 175 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 IFNA5P01569 189 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
MDC1-202ENST00000416571 SELENOTP62341 195 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 TMEM128Q5BJH2 165 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 LCN15Q6UWW0 184 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
MDC1-202ENST00000416571 TRGV2A0A075B6R0 118 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 CXCL2P19875 107 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 PARD6GQ9BYG4 376 aaPredicted RBP6.9□□□□□ -1.3
MDC1-202ENST00000416571 ARL6Q9H0F7 186 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 TMPRSS5Q9H3S3 457 aa6.9□□□□□ -1.3
MDC1-202ENST00000416571 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.3
MDC1-202ENST00000416571 A0A096LPF7 62 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 J3KRW8 73 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 HOXB5P09067 269 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 FUSP35637 526 aaKnown RBP eCLIP6.89□□□□□ -1.31
MDC1-202ENST00000416571 PLP1P60201 277 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
MDC1-202ENST00000416571 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 LRTM2Q8N967 370 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 ARV1Q9H2C2 271 aa6.89□□□□□ -1.31
MDC1-202ENST00000416571 ZNF331Q9NQX6 463 aaPredicted RBP6.89□□□□□ -1.31
MDC1-202ENST00000416571 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 SNRPCP09234 159 aaKnown RBP6.88□□□□□ -1.31
MDC1-202ENST00000416571 LEPP41159 167 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 XGP55808 180 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 AP3S2P59780 193 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 RRAS2P62070 204 aaPredicted RBP6.88□□□□□ -1.31
MDC1-202ENST00000416571 Q6ZTI0 123 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 NPVFQ9HCQ7 196 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 PSENENQ9NZ42 101 aa6.88□□□□□ -1.31
MDC1-202ENST00000416571 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 GOSR2O14653 212 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 NXPH4O95158 308 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 SFT2D2O95562 160 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 DAZ2Q13117 558 aaKnown RBP6.87□□□□□ -1.31
MDC1-202ENST00000416571 ICAM4Q14773 271 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 SPCS2Q15005 226 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
MDC1-202ENST00000416571 PXDC1Q5TGL8 231 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 LINC00305Q7Z4B0 112 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 ZNF680Q8NEM1 530 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 VSIG2Q96IQ7 327 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 C18orf15Q96N68 181 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
MDC1-202ENST00000416571 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 PXMP4Q9Y6I8 212 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
MDC1-202ENST00000416571 TRGV1A0A0A0MS02 117 aa6.86□□□□□ -1.31
MDC1-202ENST00000416571 FABP12A6NFH5 140 aa6.86□□□□□ -1.31
MDC1-202ENST00000416571 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
MDC1-202ENST00000416571 H3BTX0 84 aa6.86□□□□□ -1.31
MDC1-202ENST00000416571 MRPS12O15235 138 aaKnown RBP6.86□□□□□ -1.31
MDC1-202ENST00000416571 SSSCA1O60232 199 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms