RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
CACNA1C-208ENST00000399601 RHODO00212 210 aa9.08□□□□□ -0.96
CACNA1C-208ENST00000399601 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
CACNA1C-208ENST00000399601 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
CACNA1C-208ENST00000399601 MDC1Q14676 2089 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 ZNF318Q5VUA4 2279 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 IGLV3-9A0A075B6K5 115 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 QSER1Q2KHR3 1735 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 J3QLI3 93 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 IGLV10-54A0A075B6I4 117 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 F6UB75 175 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
CACNA1C-208ENST00000399601 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 A0A096LNI7 61 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 TDRD15B5MCY1 1934 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 IRF3Q14653 427 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 Q8NFD4 153 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
CACNA1C-208ENST00000399601 IGHV2-26A0A0B4J1V2 119 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 PINLYPA6NC86 204 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 Q6ZS92 163 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 ESM1Q9NQ30 184 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 CENPVL3A0A0U1RRI6 287 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 NDUFS6O75380 124 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 ZC2HC1BQ5TFG8 222 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 PPDPFLQ8WWR9 84 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 TUBGCP6Q96RT7 1819 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 PSMB8P28062 276 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 C1QCP02747 245 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
CACNA1C-208ENST00000399601 EFNA2O43921 213 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 CRYGSP22914 178 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 COL8A2P25067 703 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 EFNB3Q15768 340 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 ASPHD1Q5U4P2 390 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 MRPS18AQ9NVS2 196 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 IGHMP01871 453 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 HERV-K104P63124 156 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 NPBQ8NG41 125 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 TAF1LQ8IZX4 1826 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 USMG5Q96IX5 58 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 SAA4P35542 130 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 C10orf55Q5SWW7 151 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 MSRB3Q8IXL7 192 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 Q96M66 194 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
CACNA1C-208ENST00000399601 ABCA7Q8IZY2 2146 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 UBE2CO00762 179 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 DLEU1O43261 78 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 CFHR4Q92496 578 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 LIME1Q9H400 295 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 WDR90Q96KV7 1748 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 HRCT1Q6UXD1 115 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 MST1P26927 711 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 TMEM178BH3BS89 294 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 TRPT1Q86TN4 253 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
CACNA1C-208ENST00000399601 PPBPP02775 128 aa9.02□□□□□ -0.96
CACNA1C-208ENST00000399601 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.96
CACNA1C-208ENST00000399601 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 NCOR1P1Q9H4R4 102 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 TRBV7-1A0A0A6YYK4 115 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 THADAQ6YHU6 1953 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 CCL20P78556 96 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 H3BMG7 143 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 TCF20Q9UGU0 1960 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-208ENST00000399601 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
CACNA1C-208ENST00000399601 OOSP1A8MZH6 123 aa9.01□□□□□ -0.97
CACNA1C-208ENST00000399601 F8W735 103 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-208ENST00000399601 FSTP19883 344 aa9.01□□□□□ -0.97
CACNA1C-208ENST00000399601 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
CACNA1C-208ENST00000399601 DUX4L9Q6RFH8 374 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms