RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MRPL27Q9P0M9 148 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 ATP5LO75964 103 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 HERVK_113P61574 105 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 SP5Q6BEB4 398 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 POLR3KQ9Y2Y1 108 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 J3QR89 54 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IGHG2P01859 326 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 EBI3Q14213 229 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MRPL18Q9H0U6 180 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF580Q9UK33 172 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 IZUMO1RA6ND01 250 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 K7EM74 188 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 NBEAL2Q6ZNJ1 2754 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MED19A0JLT2 244 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 M0R2Z0 102 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 FABP4P15090 132 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 Q5PR19 223 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MIR17HGQ75NE6 70 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 RARRES2Q99969 163 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 TWIST1Q15672 202 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MST1LQ2TV78 715 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 CHCHD1Q96BP2 118 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 MRPL53Q96EL3 112 aaKnown RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 FGF23Q9GZV9 251 aaPredicted RBP2.71□□□□□ -1.98
VPS13C-203ENST00000395896 HIVEP1P15822 2718 aa2.71□□□□□ -1.98
VPS13C-203ENST00000395896 LYNX1G3V0Z9 82 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 IGLV2-14P01704 120 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 LYNX1P0DP58 116 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 ORMDL2Q53FV1 153 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 DNLZQ5SXM8 178 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 CLEC19AQ6UXS0 136 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 C10orf105Q8TEF2 133 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 MEGF9Q9H1U4 602 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM238LA0A1B0GVL6 79 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 A6NJY4 79 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 SLC31A2O15432 143 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 ASIPP42127 132 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 CRIP3Q6Q6R5 217 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 IGF1P05019 195 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 DLX1P56177 255 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PSG3Q16557 428 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 DEFB113Q30KQ7 82 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM136Q6ZRR5 245 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 A8MWP6 167 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PLAUP00749 431 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF581Q9P0T4 197 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 CENPVL3A0A0U1RRI6 287 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 SRRM4A7MD48 611 aaKnown RBP2.7□□□□□ -1.98
VPS13C-203ENST00000395896 FER1L6-AS1Q8NA97 138 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 SMPXQ9UHP9 88 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BKO60814 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 BRI3O95415 125 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BJP06899 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BOP23527 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BBP33778 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BDP58876 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PKIAP61925 76 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BCP62807 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 SEC11AP67812 179 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST2H2BEQ16778 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.7□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF491Q8N8L2 437 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 OCC1Q8TAD7 63 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM170AQ8WVE7 144 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BHQ93079 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BNQ99877 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 HIST1H2BMQ99879 126 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PSG8Q9UQ74 426 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 IGLV11-55A0A075B6I3 123 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 SRD5A1P18405 259 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 MRPL54Q6P161 138 aaKnown RBP2.7□□□□□ -1.98
VPS13C-203ENST00000395896 C16orf54Q6UWD8 224 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 FCER1GP30273 86 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 KRTDAPP60985 99 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 COLCA2A8K830 154 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 MMP23AO75900 390 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 FAM90A2PQ658T7 463 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TRBV19A0A075B6N1 114 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 UBE2CO00762 179 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 GTSCR1Q86UQ5 136 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 F5H697 171 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PHOX2AO14813 284 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 PF4P02776 101 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 NEU1Q99519 415 aa2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TIMM8BQ9Y5J9 83 aaPredicted RBP2.7□□□□□ -1.98
VPS13C-203ENST00000395896 TRAV3A0A0B4J244 114 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 SCO2A0A1W2PP80 73 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 C5orf52A6NGY3 159 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 RHODO00212 210 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 TNFRSF13BO14836 293 aaPredicted RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 PRSS1P07477 247 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 ODF3L1Q8IXM7 274 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 GSX1Q9H4S2 264 aaPredicted RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 LDLRAD2Q5SZI1 272 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 FAM103A1Q9BTL3 118 aaKnown RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 OVOL3O00110 214 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms