RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CHCHD1Q96BP2 118 aaKnown RBP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 ZHX1-C8orf76Q96EF9 292 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 C8orf76Q96K31 380 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 TEX37Q96LM6 180 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 ZNF714Q96N38 554 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 NPCDR1Q9BY65 106 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 PARD6GQ9BYG4 376 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 IMUPQ9GZP8 106 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 GUCA1BQ9UMX6 200 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 CELSR2Q9HCU4 2923 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 LRP2P98164 4655 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 MYO7AQ13402 2215 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 OBSL1O75147 1896 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 FMN1Q68DA7 1419 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 STAB1Q9NY15 2570 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 PLXND1Q9Y4D7 1925 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 hDV103S1A0JD37 113 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 TGOLN2O43493 480 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 CHP2O43745 196 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 CST8O60676 142 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 IFNA7P01567 189 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 TCRBP04435 133 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 PIGPP57054 158 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 ASB16-AS1Q495Z4 193 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 GLYATL3Q5SZD4 288 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 MACF1Q9UPN3 7388 aaKnown RBP-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 NCOA1Q15788 1441 aa-0.38□□□□□ -2.47
SNORD28B-201ENST00000390993 RBBP6Q7Z6E9 1792 aaKnown RBP-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 CACNA1AO00555 2505 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 ROBO3Q96MS0 1386 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 FAM236DA0A1B0GTK5 79 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 MCRIP1C9JLW8 97 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 TAX1BP3O14907 124 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 PDE6DO43924 150 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 CNIH1O95406 144 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 IGHV3-30P01768 117 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 IFNA16P05015 189 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 TPM3P06753 285 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 IGHV3-30-5P0DP03 117 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 FAM236CP0DP71 79 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 ERP29P30040 261 aaKnown RBP-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 HIST1H3AP68431 136 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 H3F3AP84243 136 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 AESQ08117 197 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 GOLT1AQ6ZVE7 132 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 C12orf45Q8N5I9 185 aaPredicted RBP-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 STAG3L4Q8TBR4 150 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 GNPDA2Q8TDQ7 276 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 ARL5BQ96KC2 179 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 PRR15LQ9BU68 103 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 MAP1LC3BQ9GZQ8 125 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 UQCC1Q9NVA1 299 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
SNORD28B-201ENST00000390993 POLQO75417 2590 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 PTPN13Q12923 2485 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 MYLKQ15746 1914 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 SNAPC4Q5SXM2 1469 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 TENM4Q6N022 2769 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 TRBV19A0A075B6N1 114 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 C9orf170A2RU37 121 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 CLDN24A6NM45 220 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 CFDP00746 253 aaPredicted RBP-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 GYPBP06028 91 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 DYNLT3P51808 116 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 SNRPD3P62318 126 aaKnown RBP-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 MIR22HGQ0VDD5 57 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 KLRD1Q13241 179 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 EDDM3AQ14507 147 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 ZNF56Q15929 161 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 TMEM14EPQ6UXP3 125 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 FOXI2Q6ZQN5 318 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 CLDN22Q8N7P3 220 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 DDI1Q8WTU0 396 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 MALSU1Q96EH3 234 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 LIMD2Q9BT23 127 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 CST11Q9H112 138 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 CACYBPQ9HB71 228 aaKnown RBP-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 NAT8BQ9UHF3 227 aa-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 FLNAP21333 2647 aaKnown RBP-0.4□□□□□ -2.47
SNORD28B-201ENST00000390993 HSPG2P98160 4391 aa-0.41□□□□□ -2.47
SNORD28B-201ENST00000390993 MAP3K5Q99683 1374 aa-0.41□□□□□ -2.47
SNORD28B-201ENST00000390993 MUC2Q02817 5179 aa-0.41□□□□□ -2.47
SNORD28B-201ENST00000390993 B4DSR2 109 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 ATP5HO75947 161 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 IFNA5P01569 189 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 DEFA3P59666 94 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 TPM4P67936 248 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 DIAPH2-AS1Q14236 149 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 NEDD8Q15843 81 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 VMA21Q3ZAQ7 101 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 OTUD6BQ8N6M0 293 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 BTF3L4Q96K17 158 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 UCK1Q9HA47 277 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 PTPRDP23468 1912 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 ZANQ9Y493 2812 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 HECW2Q9P2P5 1572 aa-0.41□□□□□ -2.48
SNORD28B-201ENST00000390993 LPAP08519 4548 aa-0.42□□□□□ -2.48
SNORD28B-201ENST00000390993 DUXBA0A1W2PPF3 345 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms