RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 HOXB4P17483 251 aaPredicted RBP8.24□□□□□ -1.09
PKP4-201ENST00000389757 PARD6GQ9BYG4 376 aaPredicted RBP8.24□□□□□ -1.09
PKP4-201ENST00000389757 PRORYQ9H606 182 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 NOTCH2Q04721 2471 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 YLPM1P49750 1951 aaKnown RBP8.24□□□□□ -1.09
PKP4-201ENST00000389757 CA1P00915 261 aaPredicted RBP8.24□□□□□ -1.09
PKP4-201ENST00000389757 DENND4CQ5VZ89 1909 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 MED13LQ71F56 2210 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 ZNF134P52741 427 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 FAM120AOSQ5T036 256 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 Q8NA96 180 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 SEM1Q6ZVN7 128 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 ARL6IP6Q8N6S5 226 aa8.24□□□□□ -1.09
PKP4-201ENST00000389757 ABCA1O95477 2261 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 AMBPP02760 352 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 RNASE1P07998 156 aaKnown RBP8.23□□□□□ -1.09
PKP4-201ENST00000389757 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
PKP4-201ENST00000389757 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 C11orf53Q8IXP5 236 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 DOCK10Q96BY6 2186 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 E9PQ18 207 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 NDUFA4O00483 81 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 IGHV4-59P01825 116 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 IGHV3-73A0A0B4J1V6 119 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 SH2D1AO60880 128 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 GZMBP10144 247 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 CD28P10747 220 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 TCTEX1D4Q5JR98 221 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 TCF23Q7RTU1 214 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 C10orf105Q8TEF2 133 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 MALRD1Q5VYJ5 2156 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
PKP4-201ENST00000389757 EVI2AP22794 236 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
PKP4-201ENST00000389757 SRSF4Q08170 494 aaKnown RBP8.22□□□□□ -1.09
PKP4-201ENST00000389757 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 MST1LQ2TV78 715 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 JKAMPQ9P055 326 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 HBDP02042 147 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 C1orf194Q5T5A4 169 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 NRGNQ92686 78 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 IGKV3D-20A0A0C4DH25 116 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 FBXL19-AS1Q494R0 122 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 COL5A1-AS1Q5SY13 56 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 C1QL4Q86Z23 238 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 TRAV8-1A0A0A6YYK1 113 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 LYZL1Q6UWQ5 148 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
PKP4-201ENST00000389757 NDUFA3O95167 84 aa8.21□□□□□ -1.09
PKP4-201ENST00000389757 GFI1BQ5VTD9 330 aa8.21□□□□□ -1.09
PKP4-201ENST00000389757 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 LYL1P12980 280 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 ZNF876PQ49A33 203 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 GNB1LQ9BYB4 327 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 XCL2Q9UBD3 114 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 H3BUA1 57 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 LHBP01229 141 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 FABP2P12104 132 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 OR11H6Q8NGC7 330 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 DPH3P1Q9H4G8 78 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 WT1-ASQ06250 92 aa8.21□□□□□ -1.1
PKP4-201ENST00000389757 Q8NFD4 153 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 DERL1Q9BUN8 251 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 MRPL27Q9P0M9 148 aaKnown RBP8.2□□□□□ -1.1
PKP4-201ENST00000389757 A0A1B0GW64 132 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 DNAL4O96015 105 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 ERCC8Q13216 396 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 SPRNQ5BIV9 151 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 SMIM12Q96EX1 92 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 LINC00614P0C842 121 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 ADMP35318 185 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 LINC01551Q86U37 167 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 TTC9CQ8N5M4 171 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 LIME1Q9H400 295 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
PKP4-201ENST00000389757 LY96Q9Y6Y9 160 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 CACNA1AO00555 2505 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 IGKV1-39P01597 117 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 IGKV1D-39P04432 117 aa8.2□□□□□ -1.1
PKP4-201ENST00000389757 SERF1AO75920 110 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 APOC4P55056 127 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 Q86TA4 180 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 KRTAP27-1Q3LI81 207 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
PKP4-201ENST00000389757 CENPVL3A0A0U1RRI6 287 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 SPINK13Q1W4C9 94 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 NCR2O95944 276 aa8.18□□□□□ -1.1
PKP4-201ENST00000389757 POU2AF1Q16633 256 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms