RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CLEC3BP05452 202 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 RAB9AP51151 201 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 TOMM20LQ6UXN7 152 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 ZNF580Q9UK33 172 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 RPH3ALQ9UNE2 315 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 SOX21Q9Y651 276 aaPredicted RBP14.92□□□□□ -0.02
GMDS-201ENST00000380805 NOTCH2Q04721 2471 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 XKRY2A2RUG3 117 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 IZUMO1RA6ND01 250 aa14.92□□□□□ -0.02
GMDS-201ENST00000380805 SERTM2A0A1B0GWG4 89 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 S100A2P29034 98 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 PSG9Q00887 426 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 DEFB113Q30KQ7 82 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 WDR73Q6P4I2 378 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 RASL11AQ6T310 242 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 GOLT1AQ6ZVE7 132 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 TSKUQ8WUA8 353 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 SERTAD4Q9NUC0 356 aa14.91□□□□□ -0.02
GMDS-201ENST00000380805 SVEP1Q4LDE5 3571 aa14.9□□□□□ -0.02
GMDS-201ENST00000380805 DIRC3C9JPN6 131 aa14.9□□□□□ -0.02
GMDS-201ENST00000380805 NPIPB6E9PJ23 425 aa14.9□□□□□ -0.02
GMDS-201ENST00000380805 CBLN1P23435 193 aa14.9□□□□□ -0.02
GMDS-201ENST00000380805 PPIFP30405 207 aaKnown RBP14.9□□□□□ -0.02
GMDS-201ENST00000380805 WIPF2Q8TF74 440 aaPredicted RBP14.9□□□□□ -0.02
GMDS-201ENST00000380805 A0A087X0K7 114 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 CYSRT1A8MQ03 144 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 K7EQM0 130 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 ATP5G2Q06055 141 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 CLEC19AQ6UXS0 136 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 SGK494Q96LW2 274 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 HIST1H2BLQ99880 126 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 AAMDCQ9H7C9 122 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 ZFP30Q9Y2G7 519 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 CLPSL1A2RUU4 121 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 PSG3Q16557 428 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 C16orf54Q6UWD8 224 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 LINC00322Q6ZN03 302 aaPredicted RBP14.89□□□□□ -0.03
GMDS-201ENST00000380805 MRPL18Q9H0U6 180 aaKnown RBP14.89□□□□□ -0.03
GMDS-201ENST00000380805 NAT8BQ9UHF3 227 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 SMAD5-AS1Q9Y6J3 95 aa14.89□□□□□ -0.03
GMDS-201ENST00000380805 TRAV8-1A0A0A6YYK1 113 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 BUB3O43684 328 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 CA1P00915 261 aaPredicted RBP14.88□□□□□ -0.03
GMDS-201ENST00000380805 FSHBP01225 129 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 FRMD6-AS1P0C7T7 363 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 IER3P46695 156 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 RELQ04864 619 aaPredicted RBP14.88□□□□□ -0.03
GMDS-201ENST00000380805 LY6EQ16553 131 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 PRR27Q6MZM9 219 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 TMEM136Q6ZRR5 245 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 MS4A10Q96PG2 267 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 RPP21Q9H633 154 aaKnown RBP14.88□□□□□ -0.03
GMDS-201ENST00000380805 CR1P17927 2039 aa14.88□□□□□ -0.03
GMDS-201ENST00000380805 TCL1AP56279 114 aa14.87□□□□□ -0.03
GMDS-201ENST00000380805 C1orf194Q5T5A4 169 aa14.87□□□□□ -0.03
GMDS-201ENST00000380805 CCDC168Q8NDH2 2452 aa14.87□□□□□ -0.03
GMDS-201ENST00000380805 FAM231BA6NCW3 169 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 FBLL1A6NHQ2 334 aaKnown RBP14.86□□□□□ -0.03
GMDS-201ENST00000380805 OR4B1Q8NGF8 309 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 GFRA4Q9GZZ7 299 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 U3KQE9 123 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 PRRC2AP48634 2157 aaKnown RBP14.86□□□□□ -0.03
GMDS-201ENST00000380805 ZNF785A8K8V0 405 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 HLA-DQA1P01909 254 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 PDZD11Q5EBL8 140 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 COX8CQ7Z4L0 72 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 ATP5L2Q7Z4Y8 100 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 NUP35Q8NFH5 326 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 USMG5Q96IX5 58 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 NEU1Q99519 415 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 PSG8Q9UQ74 426 aa14.86□□□□□ -0.03
GMDS-201ENST00000380805 M0R3E3 92 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 P01737 135 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 AMBPP02760 352 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 TRGV3P03979 118 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 CFHR3Q02985 330 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 PYY3Q5JQD4 70 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 C9orf152Q5JTZ5 239 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 C9orf139Q6ZV77 190 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 PRNTQ86SH4 94 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 OR10D4PQ8NGN7 298 aa14.85□□□□□ -0.03
GMDS-201ENST00000380805 A8MWL6 223 aa14.84□□□□□ -0.03
GMDS-201ENST00000380805 FABP4P15090 132 aa14.84□□□□□ -0.03
GMDS-201ENST00000380805 DNLZQ5SXM8 178 aa14.84□□□□□ -0.03
GMDS-201ENST00000380805 CIARTQ8N365 385 aaPredicted RBP14.84□□□□□ -0.03
GMDS-201ENST00000380805 ZNF331Q9NQX6 463 aaPredicted RBP14.84□□□□□ -0.03
GMDS-201ENST00000380805 LINC00527Q9UJ94 153 aa14.84□□□□□ -0.03
GMDS-201ENST00000380805 ZNF469Q96JG9 3925 aaPredicted RBP14.84□□□□□ -0.03
GMDS-201ENST00000380805 IGHV3-35A0A0C4DH35 117 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 IGLV1-40P01703 118 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 IGHG4P01861 327 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 IGHV4-31P0DP07 118 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 CSN1S1P47710 185 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 BLCAPP62952 87 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 KRTAP1-3Q8IUG1 177 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.03
GMDS-201ENST00000380805 GNB4Q9HAV0 340 aa14.83□□□□□ -0.03
GMDS-201ENST00000380805 A0A1B0GXF2 115 aa14.83□□□□□ -0.04
GMDS-201ENST00000380805 HIGD1CA8MV81 97 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms