RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FBXL7Q9UJT9 491 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 IGHV3-49A0A0A0MS15 119 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 NDUFS5O43920 106 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 PRB2P02812 416 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 GATA2P23769 480 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 ZNF672Q499Z4 452 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 PIP4P1Q86T03 277 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 ASXL3Q9C0F0 2248 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 DTX1Q86Y01 620 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 CCDC88CQ9P219 2028 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 A0A0B4J2C4 111 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 ERCC8Q13216 396 aa11.51□□□□□ -0.57
RAPGEF1-202ENST00000372190 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 KLF5Q13887 457 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 MBD3L3A6NE82 208 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 MBD3L2Q8NHZ7 208 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 PLXNA3P51805 1871 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 EFNB3Q15768 340 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 NPYP01303 97 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 IGHV1-46P01743 117 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
RAPGEF1-202ENST00000372190 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 ATP5G1P05496 136 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 HTN3P15516 51 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 SEC61GP60059 68 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 APC2O95996 2303 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 LY6G6EA0A0G2JKS1 128 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 TEX48A0A1B0GUV7 120 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 C12orf77C9JDV5 145 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 PYYP10082 97 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 U3KQA8 63 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 TCRBV4S1A1TA0A5B7 111 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 CCL25O15444 150 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
RAPGEF1-202ENST00000372190 B4DSR2 109 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 SLC25A16P16260 332 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 CXCL5P42830 114 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 WFDC1Q9HC57 220 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 SPTBP11277 2137 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 OVOL1O14753 267 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 CCL3L1P16619 93 aa11.48□□□□□ -0.57
RAPGEF1-202ENST00000372190 DOCK4Q8N1I0 1966 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 AMTNQ6UX39 209 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 J3QRE1 110 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 WBP1Q96G27 269 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 A0A087WX48 190 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 PRB1P04280 392 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 Q8NFD4 153 aa11.47□□□□□ -0.57
RAPGEF1-202ENST00000372190 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 C12orf74Q32Q52 190 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 C8orf46Q8TAG6 207 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 ZNF319Q9P2F9 582 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 PLXNA4Q9HCM2 1894 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 CLPSP04118 112 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 TMEM141Q96I45 108 aa11.46□□□□□ -0.57
RAPGEF1-202ENST00000372190 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.58
RAPGEF1-202ENST00000372190 CACNA1EQ15878 2313 aa11.46□□□□□ -0.58
RAPGEF1-202ENST00000372190 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.58
RAPGEF1-202ENST00000372190 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 IGLL1P15814 213 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 ZNF138P52744 262 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 PRSS57Q6UWY2 283 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 HLA-DRB4X5D2U9 266 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 H0YIZ8 118 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 K7ERJ3 54 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 GAS1P54826 345 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 ZNF474Q6S9Z5 364 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 IGFL3Q6UXB1 125 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 VSIRQ9H7M9 311 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 FBLN5Q9UBX5 448 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
RAPGEF1-202ENST00000372190 EFNA2O43921 213 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 SS18Q15532 418 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 SCRT2Q9NQ03 307 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 S4R3C0 116 aa11.44□□□□□ -0.58
RAPGEF1-202ENST00000372190 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms