RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RAB4BP61018 213 aa15.83■□□□□ 0.12
CHRNA3-202ENST00000348639 CDPF1Q6NVV7 123 aa15.83■□□□□ 0.12
CHRNA3-202ENST00000348639 DAZAP1Q96EP5 407 aaKnown RBP15.83■□□□□ 0.12
CHRNA3-202ENST00000348639 AAMDCQ9H7C9 122 aa15.83■□□□□ 0.12
CHRNA3-202ENST00000348639 HIGD1CA8MV81 97 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 DIRC3C9JPN6 131 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 Q0VG73 95 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 C19orf54Q5BKX5 351 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 EEF1AKMT3Q96AZ1 226 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 CCDC140Q96MF4 163 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 ZFP30Q9Y2G7 519 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 TRBV7-1A0A0A6YYK4 115 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 A8MWL6 223 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 PSG9Q00887 426 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 JOSD1Q15040 202 aaPredicted RBP15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 PSG3Q16557 428 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 TOMM20LQ6UXN7 152 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 TP53TG3Q9ULZ0 132 aa15.82■□□□□ 0.12
CHRNA3-202ENST00000348639 TRAV41A0A0B4J266 112 aa15.81■□□□□ 0.12
CHRNA3-202ENST00000348639 NPIPB6E9PJ23 425 aa15.81■□□□□ 0.12
CHRNA3-202ENST00000348639 COL8A1P27658 744 aa15.81■□□□□ 0.12
CHRNA3-202ENST00000348639 ZFAND3Q9H8U3 227 aa15.81■□□□□ 0.12
CHRNA3-202ENST00000348639 IGHV3-35A0A0C4DH35 117 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 NUPR1O60356 82 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 SLC25A16P16260 332 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 LY6EQ16553 131 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 C9orf152Q5JTZ5 239 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 MS4A10Q96PG2 267 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 PSG8Q9UQ74 426 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 ANKRD17O75179 2603 aaKnown RBP15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 M0R3E3 92 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 ESDP10768 282 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 CLEC19AQ6UXS0 136 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 ATP5L2Q7Z4Y8 100 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 GFRA4Q9GZZ7 299 aa15.8■□□□□ 0.12
CHRNA3-202ENST00000348639 SERTM2A0A1B0GWG4 89 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 AVPP01185 164 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 GATA3P23771 443 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 ARL6IP6Q8N6S5 226 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 OR4B1Q8NGF8 309 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 OR5R1Q8NH85 324 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 LINC00527Q9UJ94 153 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 SMAD5-AS1Q9Y6J3 95 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 POLQO75417 2590 aa15.79■□□□□ 0.12
CHRNA3-202ENST00000348639 IGHV3OR16-8A0A075B7F1 116 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 TRAV20A0A0B4J274 112 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 APCSP02743 223 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 CSN1S1P47710 185 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 RAB9AP51151 201 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 LINC00310P59036 64 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 ATP6V0BQ99437 205 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 FAM231BA6NCW3 169 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 A6NDX4 124 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 FAM223BA6NKX1 122 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 H3BUX3 64 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 ZNF253O75346 499 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 GZMBP10144 247 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 ATP5G2Q06055 141 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 KIAA1644Q3SXP7 199 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 FAM223AQ8IWN6 122 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 MAPK1IP1LQ8NDC0 245 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 GNB4Q9HAV0 340 aa15.78■□□□□ 0.12
CHRNA3-202ENST00000348639 IGF1P05019 195 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 OR10J3Q5JRS4 329 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 C16orf54Q6UWD8 224 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 Q71RC1 249 aaPredicted RBP15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 TCF24Q7RTU0 167 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 BAGE3Q86Y29 109 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 GTSF1Q8WW33 167 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 ZC2HC1AQ96GY0 325 aa15.77■□□□□ 0.12
CHRNA3-202ENST00000348639 A0A1B0GXF2 115 aa15.77■□□□□ 0.11
CHRNA3-202ENST00000348639 ZNF785A8K8V0 405 aa15.77■□□□□ 0.11
CHRNA3-202ENST00000348639 SERF1AO75920 110 aa15.77■□□□□ 0.11
CHRNA3-202ENST00000348639 PRDM13Q9H4Q3 707 aa15.77■□□□□ 0.11
CHRNA3-202ENST00000348639 BUB3O43684 328 aa15.76■□□□□ 0.11
CHRNA3-202ENST00000348639 KRTAP10-9P60411 292 aa15.76■□□□□ 0.11
CHRNA3-202ENST00000348639 SLAQ13239 276 aa15.76■□□□□ 0.11
CHRNA3-202ENST00000348639 GDF5OSQ5U4N7 250 aa15.76■□□□□ 0.11
CHRNA3-202ENST00000348639 NOL4LQ96MY1 436 aaPredicted RBP15.76■□□□□ 0.11
CHRNA3-202ENST00000348639 CLPSL1A2RUU4 121 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 M0QZK8 103 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 PRB4P10163 310 aaPredicted RBP15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 PAFAH1B2P68402 229 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 RELQ04864 619 aaPredicted RBP15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 LINC00587B1AMM8 73 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 IGHG2P01859 326 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 SRIP30626 198 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 RBPMS2Q6ZRY4 209 aaKnown RBP15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 LINC01356Q8N9X3 169 aa15.75■□□□□ 0.11
CHRNA3-202ENST00000348639 A0A087X0K7 114 aa15.74■□□□□ 0.11
CHRNA3-202ENST00000348639 F2Z2F3 143 aa15.74■□□□□ 0.11
CHRNA3-202ENST00000348639 TPPP2P59282 170 aa15.74■□□□□ 0.11
CHRNA3-202ENST00000348639 OR2D3Q8NGH3 330 aa15.74■□□□□ 0.11
CHRNA3-202ENST00000348639 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.74■□□□□ 0.11
CHRNA3-202ENST00000348639 A0A096LNT2 108 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 HBBP68871 147 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 FBLL1A6NHQ2 334 aaKnown RBP15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 BRI3O95415 125 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 TRGV3P03979 118 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms