RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SPTA1P02549 2419 aa17.5■□□□□ 0.39
PNKP-201ENST00000322344 ZNF785A8K8V0 405 aa17.5■□□□□ 0.39
PNKP-201ENST00000322344 APOHP02749 345 aaPredicted RBP17.5■□□□□ 0.39
PNKP-201ENST00000322344 CHCHD1Q96BP2 118 aaKnown RBP17.5■□□□□ 0.39
PNKP-201ENST00000322344 A0A1B0GW15 77 aa17.49■□□□□ 0.39
PNKP-201ENST00000322344 FAM181BA6NEQ2 426 aa17.49■□□□□ 0.39
PNKP-201ENST00000322344 PMCHL1Q16048 86 aa17.49■□□□□ 0.39
PNKP-201ENST00000322344 DMRTA1Q5VZB9 504 aa17.49■□□□□ 0.39
PNKP-201ENST00000322344 Q6AWC8 147 aa17.49■□□□□ 0.39
PNKP-201ENST00000322344 TPRP12270 2363 aaKnown RBP17.49■□□□□ 0.39
PNKP-201ENST00000322344 LOC102724200A0A096LPH7 203 aaPredicted RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 FBLL1A6NHQ2 334 aaKnown RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 SH2D7A6NKC9 451 aaPredicted RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 CTRLP40313 264 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 RIGQ13278 110 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 KLK9Q2XQG4 91 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 CYB5R2Q6BCY4 276 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 FAM110DQ8TAY7 271 aaPredicted RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 LPAR2Q9HBW0 351 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 RABAC1Q9UI14 185 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 KLK9Q9UKQ9 250 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 ARHGAP32A7KAX9 2087 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 A0A1B0GUT8 65 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 CT45A10P0DMU9 189 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 NUTF2P61970 127 aaKnown RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 LY6DQ14210 128 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 BCL6BQ8N143 479 aaPredicted RBP17.48■□□□□ 0.39
PNKP-201ENST00000322344 GATD1Q8NB37 220 aa17.48■□□□□ 0.39
PNKP-201ENST00000322344 OR2T8A6NH00 312 aa17.47■□□□□ 0.39
PNKP-201ENST00000322344 M0R3E3 92 aa17.47■□□□□ 0.39
PNKP-201ENST00000322344 CTSGP08311 255 aa17.47■□□□□ 0.39
PNKP-201ENST00000322344 SPATA45Q537H7 98 aa17.47■□□□□ 0.39
PNKP-201ENST00000322344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.47■□□□□ 0.39
PNKP-201ENST00000322344 PRORYQ9H606 182 aa17.47■□□□□ 0.39
PNKP-201ENST00000322344 OVOL3O00110 214 aa17.46■□□□□ 0.39
PNKP-201ENST00000322344 BTF3P20290 206 aaKnown RBP17.46■□□□□ 0.39
PNKP-201ENST00000322344 Q71RC1 249 aaPredicted RBP17.46■□□□□ 0.39
PNKP-201ENST00000322344 ITLN2Q8WWU7 325 aaPredicted RBP17.46■□□□□ 0.39
PNKP-201ENST00000322344 URB1-AS1Q96HZ7 61 aa17.46■□□□□ 0.39
PNKP-201ENST00000322344 IGHV3-23P01764 117 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 LMO4P61968 165 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 AJUBAQ96IF1 538 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 RNF224P0DH78 156 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 FAM120AOSQ5T036 256 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 COX8CQ7Z4L0 72 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 KLHDC1Q8N7A1 406 aa17.45■□□□□ 0.38
PNKP-201ENST00000322344 CRIP1P50238 77 aa17.44■□□□□ 0.38
PNKP-201ENST00000322344 SAA4P35542 130 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 SAPCD1Q5SSQ6 148 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 EBLN2Q6P2I7 272 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 UNQ5815/PRO19632Q6UWF5 114 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 IGF2RP11717 2491 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 C2orf70A6NJV1 201 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 ZNF502Q8TBZ5 544 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 TMUB1Q9BVT8 246 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 BPESC1Q9GZL8 116 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 UQCR10Q9UDW1 63 aa17.43■□□□□ 0.38
PNKP-201ENST00000322344 ABCA1O95477 2261 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 LINC00614P0C842 121 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 RAB9AP51151 201 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 C20orf202A1L168 122 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 ZZEF1O43149 2961 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 ARMS2P0C7Q2 107 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 C8orf49Q96NF6 230 aa17.42■□□□□ 0.38
PNKP-201ENST00000322344 NPFFO15130 113 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 OR5AL1P0C617 328 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 C15orf32Q32M92 178 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 PRR31Q5SQ13 230 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 ASCL2Q99929 193 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 TMEM70Q9BUB7 260 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 ATP6V0E1O15342 81 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 IGLC3P0DOY3 106 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 ECSCRQ19T08 205 aa17.4■□□□□ 0.38
PNKP-201ENST00000322344 IGHV1-24A0A0C4DH33 117 aa17.39■□□□□ 0.37
PNKP-201ENST00000322344 TMEM189A5PLL7 270 aa17.39■□□□□ 0.37
PNKP-201ENST00000322344 RHOGP84095 191 aa17.39■□□□□ 0.37
PNKP-201ENST00000322344 LCN12Q6JVE5 192 aa17.39■□□□□ 0.37
PNKP-201ENST00000322344 SMAD5-AS1Q9Y6J3 95 aa17.39■□□□□ 0.37
PNKP-201ENST00000322344 CENPVL3A0A0U1RRI6 287 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 TCAPO15273 167 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 GPR183P32249 361 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 TRAV9-2A0A087WT02 112 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 SH2D1AO60880 128 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 RELQ04864 619 aaPredicted RBP17.38■□□□□ 0.37
PNKP-201ENST00000322344 ZNF493Q6ZR52 646 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 PRR25Q96S07 402 aa17.38■□□□□ 0.37
PNKP-201ENST00000322344 IGKV2-40A0A087WW87 121 aaPredicted RBP17.37■□□□□ 0.37
PNKP-201ENST00000322344 A0A087X0K7 114 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 M0QZ24 198 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 CRXO43186 299 aaPredicted RBP17.37■□□□□ 0.37
PNKP-201ENST00000322344 IGKV2D-40P01614 121 aaPredicted RBP17.37■□□□□ 0.37
PNKP-201ENST00000322344 RPS20P60866 119 aaKnown RBP17.37■□□□□ 0.37
PNKP-201ENST00000322344 LEPROTL1O95214 131 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 GOSR1O95249 250 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 RPLP1P05386 114 aaKnown RBP17.37■□□□□ 0.37
PNKP-201ENST00000322344 ZFAND3Q9H8U3 227 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 CLEC5AQ9NY25 188 aa17.37■□□□□ 0.37
PNKP-201ENST00000322344 C19orf84I3L1E1 186 aa17.36■□□□□ 0.37
PNKP-201ENST00000322344 BMI1P35226 326 aa17.36■□□□□ 0.37
PNKP-201ENST00000322344 LRBAP50851 2863 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms