RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Mbnl2Q8C181 373 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Mrgpra6Q91ZC6 301 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 EpcamQ99JW5 315 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Q9D727 114 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Tnfrsf13cQ9D8D0 175 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Vstm2bQ9JME9 285 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Igkv10-95A0A0G2JFY3 115 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm39566A0A1B0GT45 1251 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm12886B1AZM5 119 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Itln1O88310 313 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Arl14eplQ3UKZ7 152 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Vdac1Q60932 296 aaKnown RBP10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 SriQ6P069 198 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Tbpl2Q6SJ95 350 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Dcaf12Q8BGZ3 453 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Vwc2Q8C8N3 324 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pdcd1lg2Q9WUL5 247 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Tusc2Q9WVF8 110 aa10.52□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Ighv1-47A0A0A6YY41 117 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Prss2P07146 246 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gata3P23772 443 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr917Q7TRC3 309 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pygo2Q80V76 405 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Zc2hc1aQ8BJH1 324 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 2610044O15Rik8A0A087WRJ1 410 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Trbv29A0A0G2LB96 114 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm6665F6Y363 85 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Defa13P50711 93 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Smim9Q3V0X1 137 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Rhox10Q4TU83 196 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr965Q7TRA7 312 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 SptssaQ8R207 71 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr51Q8VGG9 307 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr1331K7N684 317 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pde6dO55057 150 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm20767O70517 169 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Hoxa3P02831 443 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pip5k1aP70182 546 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Taar6Q5QD13 345 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Trav8d-2Q5R1B6 112 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pom121l2Q5SW25 972 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr1333Q7TQV7 317 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm13199Q8C8E0 125 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Acer1Q8R4X1 273 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr1330Q8VEY6 315 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr1239Q8VGM8 305 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Fam162bQ9CX19 157 aa10.51□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Hprt1P00493 218 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Igkv7-33P01632 114 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 NmsQ5H8A1 153 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 2210407C18RikQ6YI28 220 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Smim12Q78RX3 92 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Poc1bQ8BHD1 476 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Q8C708 225 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Lrp11Q8CB67 483 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Ddb2Q99J79 432 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm9817Q9D2M0 144 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Psmb2Q9R1P3 201 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Nup210Q9QY81 1886 aaKnown RBP10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Ighv1-78A0A0G2JGN3 117 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm14548E9Q1Z6 680 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Pira2F8VQ94 680 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm20532G3UXR8 106 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm20877J3QPZ4 227 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 P01822 137 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 CrpP14847 225 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Sap30lQ5SQF8 182 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr1535Q7TQU0 326 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Sdhaf4Q8BTE0 104 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Tmem91Q8C581 172 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Spsb1Q9D5L7 273 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Vmn1r54Q9EPB8 315 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm12057A0A087WR21 115 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm10881P01642 115 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Ly6aP05533 134 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Sssca1P56873 199 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gnb1P62874 340 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 CxadrP97792 365 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Olfr804Q7TRH7 314 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Tmem140Q8BGY5 185 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 AhspQ9CY02 102 aa10.5□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Col5a3Q9JLI2 1739 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Trav6d-5A0A075B6B9 112 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Vmn1r170K7N6W9 304 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Defa6P50704 93 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gcm1P70348 436 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 StumQ0VBF8 141 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Zfp729bQ80VN4 1045 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Phf7Q9DAG9 307 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Cml1Q9JIZ0 222 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Wnk2Q3UH66 2149 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm13030A2APQ6 143 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Zfp648D3Z0W3 525 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Mtco2P00405 227 aaKnown RBP10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gpr12P35412 334 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 SgcbP82349 320 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Cfhr1Q61406 343 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Zfp92Q62396 488 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Hide1Q75VT8 222 aa10.49□□□□□ -0.73
Pcdh1-202ENSMUST00000159405 Gm10190Q8BSD7 107 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms