RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vmn1r114L7N226 321 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Vmn1r126L7N2C8 321 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Tctn2Q2MV57 700 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gfod1Q3UHD2 390 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Trav8d-1Q5R1H8 112 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Repin1Q5U4E2 545 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Rsl1Q7M6Y1 485 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr924Q7TRB8 308 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Psg16Q8K0U8 395 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Xrcc3Q9CXE6 349 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 PifoQ9D9W1 207 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Q9DAF8 208 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr926Q9EQ98 308 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm614Q3V2K1 191 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 SepsecsQ6P6M7 504 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 H2afb1Q9CQ70 111 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Q9CQ90 155 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Lypd8Q9D7S0 255 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Smco4Q9JIS3 59 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 P04940 107 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 P04941 107 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Pax6P63015 422 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Pate4Q09098 99 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Prss44Q402U7 372 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Taar3Q5QD16 343 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Tmem106bQ80X71 275 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr482Q8VG03 323 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ighv1-18A0A0A6YXN4 117 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr1274-psA0A1L1SQ02 309 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 P01783 136 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Bex6Q3TZW7 114 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Stpg2Q8C8J0 561 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr736Q8VFT6 312 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr362Q8VGV7 317 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 PigcQ9CXR4 297 aa13.07□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ighv5-9A0A075B5Q2 117 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Trav6-1A0A075B5Z8 112 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Cd5P13379 494 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Neil3Q8K203 606 aaKnown RBP13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr76Q8VFV2 317 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ndufa11Q9D8B4 141 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Pkd1l2Q7TN88 2461 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm4744D3Z3S5 154 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 LoxP28301 411 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 PmchP56942 165 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 EcscrQ3TZW0 214 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Pbp2Q8VIN1 187 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Smdt1Q9DB10 107 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Abhd5Q9DBL9 351 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Sfrp4Q9Z1N6 351 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ccpg1osV9GXK1 122 aa13.06□□□□□ -0.32
Trim39-203ENSMUST00000113706 P01728 117 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Harbi1Q8BR93 349 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Tex43Q9D9I1 141 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Esp34G3UXG0 151 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Hist1h1aP43275 213 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 ClcP97400 68 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Tle4Q62441 773 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 AdoQ6PDY2 256 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ndufa6Q9CQZ5 131 aaKnown RBP13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Sh2d6Q9D413 297 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm20481G3UXK4 153 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 PomcP01193 235 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 P01803 113 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Iglc2P01844 104 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Prss2P07146 246 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Hoxa6P09092 232 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr641Q8VGX6 312 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 4933400A11RikQ9CR52 288 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Q9CRC3 126 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Eaf1Q9D4C5 268 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 AcacbE9Q4Z2 2448 aa13.05□□□□□ -0.32
Trim39-203ENSMUST00000113706 Igkv4-51A0N8I8 119 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm16519F8VQK7 162 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr138Q7TRI7 312 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Cisd1Q91WS0 108 aaKnown RBP13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Epdr1Q99M71 224 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Sptbn2Q68FG2 2388 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Zzef1Q5SSH7 2924 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Lrrk2Q5S006 2527 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ighv6-4A0A0A6YX19 119 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Hbb-bh2B2RVB7 147 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Cox6a1P43024 111 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr1026Q7TR90 307 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr223Q8VF69 319 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Hint2Q9D0S9 163 aa13.04□□□□□ -0.32
Trim39-203ENSMUST00000113706 Scgb1b29D2XZ31 93 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Scgb1b20E9PWZ2 93 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm20830J3KML6 227 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Pet117P0DJF2 80 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Cpne2P59108 548 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Spata46Q4FZF2 204 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Tbpl2Q6SJ95 350 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Rab7aP51150 207 aaKnown RBP13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Mcrip1Q3UGS4 97 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Fxyd3Q61835 88 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Olfr338Q8VGK6 306 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Rab29Q91YQ1 204 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Esp8F7AMQ8 149 aa13.03□□□□□ -0.32
Trim39-203ENSMUST00000113706 Rps16P14131 146 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms