RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 IcaQ9DBD0 700 aa17.23■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Tln2Q71LX4 2375 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Helz2E9QAM5 2947 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Ighv1-31A0A0A6YWK5 117 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Olfr1289A0A288CFY5 326 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 P01881 257 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Prrx1P63013 245 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Cfc1P97766 202 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Sap30lQ5SQF8 182 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Zfp92Q62396 488 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Morn2Q6UL01 79 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Znf2Q8BIQ3 427 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Rbm48Q8K2X2 371 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Rab40cQ8VHQ4 281 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Zfp869Q9DC47 529 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Usf3B2RUQ2 2221 aa17.22■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Kcnk15B2RVL1 343 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Prss32E9Q409 334 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Gm14408E9Q6B9 136 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Gm4778L7N229 365 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Arf6P62331 175 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Dirc2Q8BFQ6 478 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 IdnkQ8R0J8 184 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 NagkQ9QZ08 343 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Fxyd1Q9Z239 92 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Ighv1-7A0A075B5T7 117 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Tspan15F7BWT7 294 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Sult2a4L7N245 285 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Hspb7P35385 169 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Npas1P97459 594 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Prrc1Q3UPH1 443 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Tbpl2Q6SJ95 350 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Vkorc1l1Q6TEK5 176 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Scgb2b24Q7M747 112 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Olfr907Q7TRC7 310 aa17.21■□□□□ 0.35
Ccdc88a-202ENSMUST00000109477 Svep1A2AVA0 3567 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Rpl23a-ps3A0A140T8M7 156 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm12790B1AUV6 201 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 4930467E23RikD3Z1P8 350 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm15319E9Q637 350 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm43191F6YIH5 235 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm21882J3QN86 361 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Pax1P09084 446 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Ier2P17950 221 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Rpl23aP62751 156 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Dlx4P70436 240 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr1148Q7TR35 314 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Fam168aQ8BGZ2 244 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 C030005K15RikQ8BQN9 115 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Spink6Q8BT20 105 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm21119Q8C646 350 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr129Q8VEY1 330 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr512Q8VFZ4 326 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Tmprss11dQ8VHK8 417 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Epdr1Q99M71 224 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Vmn1r47Q9EQ51 310 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Trex2Q9R1A9 236 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 DeddQ9Z1L3 318 aa17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 FlnbQ80X90 2602 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 A0A286YDM5 308 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 F2rl2O08675 369 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Klrd1O54707 179 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Cst7O89098 144 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 P01806 116 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Tpsb2P21845 276 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Ube2kP61087 200 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 HrasQ61411 189 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Nbl1Q61477 178 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr1385Q7TQT1 309 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Tmem212Q8C6V3 187 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Hoxc12Q8K5B8 280 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Nabp2Q8R2Y9 212 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Mob3bQ8VE04 216 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr1279Q8VF38 313 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr508Q8VG42 310 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr136Q8VG72 312 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 NcmapQ99JS0 100 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Mrpl3Q99N95 348 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 4933407L21RikQ9D476 131 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 TollipQ9QZ06 274 aa17.19■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Trav6-1A0A075B5Z8 112 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Lmo4P61969 165 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Taar4Q5QD15 347 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Ppp1r3cQ7TMB3 317 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Ttc9cQ810A3 171 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 F930015N05RikQ8C3A3 210 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Neil3Q8K203 606 aaKnown RBP17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 AspaQ8R3P0 312 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Pla2g16Q8R3U1 162 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 RhovQ8VDU1 236 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Olfr279Q8VFD8 310 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Lamtor1Q9CQ22 161 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Hsd17b11Q9EQ06 298 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Znf22Q9ERU3 237 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Ighv1-47A0A0A6YY41 117 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm45871A0A1B0GRI9 540 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Igkv4-51A0N8I8 119 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Gm37988J3QM41 62 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 Sesn1P58006 492 aa17.18■□□□□ 0.34
Ccdc88a-202ENSMUST00000109477 NfybP63139 207 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms