RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Fgf14P70379 247 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr323Q5NCD0 323 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Zfp85Q7TMC9 473 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ssr2Q9CPW5 183 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Dusp21Q9D9D8 189 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Iqcf5Q9DAL7 148 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Six6Q9QZ28 246 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Umad1E0CX23 159 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm6970F7DCP6 221 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Vax1Q2NKI2 338 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 RflnbQ5SVD0 216 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 SriQ6P069 198 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Shisa5Q9D7I0 235 aa7.56□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ldlrad3A2AR95 345 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Klk1b22P15948 259 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ca5aP23589 299 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Prss48Q14B25 312 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Lpar6Q8BMC0 344 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Vmn1r75Q8R289 305 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 MrgprgQ91ZB5 289 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm35315A0A1B0GRI2 571 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Wdr86D3Z757 380 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 GrnP28798 589 aaKnown RBP7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gata4Q08369 441 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr360Q8VFP3 317 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Zfp959Q91VM8 539 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm10306Q9CUK2 115 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Tmem269Q9D4Y8 254 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Slc25a22Q9D6M3 323 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Tomm5B1AXP6 51 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm14288E9Q9W0 88 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 SeboxP70368 190 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Fam89aQ14BJ1 175 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 D17Wsu92eQ3TT38 291 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Cd164Q9R0L9 197 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 3425401B19RikD3Z1D3 1412 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ighv1-26A0A075B5V0 117 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 A0A1Y7VLU2 103 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Edn2P22389 175 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 VhlP40338 181 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gfi1P70338 423 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 PrlhrQ6VMN6 370 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 H2-M10.4Q85ZW8 331 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Mmd2Q8R189 247 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Nfam1Q8R4V1 264 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Prelid3aQ8VE85 172 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Carhsp1Q9CR86 148 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Dynlrb2Q9DAJ5 96 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hils1Q9QYL0 170 aa7.55□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm6993A0A1W2P738 69 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 P01798 113 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ly6gP35461 111 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Timm8bP62077 83 aaKnown RBP7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Col8a1Q00780 744 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Cnrip1Q5M8N0 164 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gpr84Q8CIM5 396 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ino80Q6ZPV2 1559 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Zfp648D3Z0W3 525 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 4930522L14RikE9QAG4 666 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 FlgP11088 336 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Igll1P20764 209 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Upk2P38575 184 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Mansc4Q3UU94 337 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Phlda1Q62392 405 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Nrn1lQ8C4W3 162 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Fam78aQ8C552 283 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 BmfQ91ZE9 185 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hspb9Q9DAM3 168 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Mfap5Q9QZJ6 164 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Cbln1Q9R171 193 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Itsn2Q9Z0R6 1659 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Opn1swP51491 346 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Hist1h2bkQ8CGP1 126 aaKnown RBP7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr223Q8VF69 319 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ly96Q9JHF9 160 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm5129F6YHA9 99 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gpr6Q6YNI2 363 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Olfr312Q7TRZ9 308 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Nmes1Q810Q5 83 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Znrf4Q9DAH2 327 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Ighv1-77A0A0G2JGS9 117 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Thap8E9Q695 213 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 SrgnP13609 152 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 SeleQ00690 612 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Stpg2Q8C8J0 561 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Mrpl53Q9D1H8 118 aaKnown RBP7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Tex37Q9DAG4 180 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Mast1Q9R1L5 1570 aa7.54□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm10271F6WY25 52 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm19684G3UZ45 117 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm7534Q3UU21 679 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Nupr2Q497P3 102 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Foxg1Q60987 481 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Srsf7Q8BL97 267 aaKnown RBP7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Tlcd2Q8VC26 310 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Dusp18Q8VE01 188 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 AU041133A0A0J9YVH3 498 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Gm14444A2ARW3 426 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 Saxo1B1AXP3 476 aa7.53□□□□□ -1.2
Clcn3-202ENSMUST00000056508 5430403G16RikD3Z5L4 667 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms