RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Derl1Q99J56 251 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Epdr1Q99M71 224 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Lurap1Q9D6I9 239 aa12.46□□□□□ -0.41
Ushbp1-201ENSMUST00000049184 Ighv6-3A0A075B5T2 118 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Igkv13-85A0A075B666 115 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr609E9Q4X7 319 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Sod1P08228 154 aaKnown RBP12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 C2cd4dP0CG09 341 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr15P23275 312 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Hoxd11P23813 323 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Pdlim4P70271 330 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 PkibQ04758 92 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Klf3Q60980 344 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr399Q7TRX3 311 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp799Q8BHK4 648 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mrps11Q9DCA2 191 aaKnown RBP12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr972Q9EQA2 314 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cml1Q9JIZ0 222 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Dnase2bQ9QY48 354 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cbln1Q9R171 193 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Lhx2Q9Z0S2 406 aa12.46□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Col5a1O88207 1838 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm10778A0A087WNP5 499 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp972A2AW65 139 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr221B2RVX8 311 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm5039J3QNT6 144 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Ifna4P07351 186 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 PtcraP0C6B2 199 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Asgr2P24721 301 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 G6pcP35576 357 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 OsmP53347 263 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Arf1P84078 181 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tff1Q08423 87 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Bex6Q3TZW7 114 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tra2aQ6PFR5 281 aaKnown RBP12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rgs13Q8K443 158 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr469Q8VF66 314 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1448Q8VFX1 314 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mrpl49Q9CQ40 166 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 AplnrQ9WV08 377 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Notch4P31695 1964 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Sdk2Q6V4S5 2176 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1328B1ARV2 313 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Klri1B2KG20 248 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Adh1P00329 375 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 P01674 108 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Wnt2P21552 360 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Hist1h1eP43274 219 aaKnown RBP12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rtp3Q5QGU6 474 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm5148Q8BGG2 154 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Stac2Q8R1B0 408 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 EpcamQ99JW5 315 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Defb5Q9EPV9 64 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Chst5Q9QUP4 395 aa12.45□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm14412A2ARR7 526 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1016A2ASV2 309 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr779E9PUS9 130 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm8882E9Q7E4 283 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Scgb1b3J3QJY4 93 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tnfrsf17O88472 185 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 P01680 129 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 P06323 132 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm10842Q3U587 122 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 ZpbpQ62522 350 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vstm2lQ6PDS0 220 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr859Q7TRF5 309 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr344Q8VFP9 309 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr983Q8VG90 315 aa12.44□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 2610044O15Rik8A0A087WRJ1 410 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vmn1r149E9PWL6 307 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vmn1r101E9Q365 307 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr624F8VQI7 308 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vmn1r158G3UY92 307 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tnfsf11O35235 316 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Syngr2O55101 224 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Siah2Q06986 325 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fam174bQ8K064 153 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr822Q8VFU1 312 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr124Q8VGW6 315 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cox20Q9D7J4 117 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 NgbQ9ER97 151 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tnrc18Q80WC3 2878 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Igkv14-100A0A0G2JG36 117 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1293-psA0A1L1SVB5 326 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm44501A8R0T9 150 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rnf212F6TQD1 307 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm6665F6Y363 85 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm17654F7AXR3 209 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm20403G3UYB0 123 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm21244J3QK38 227 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Atpif1O35143 106 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mtco2P00405 227 aaKnown RBP12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 P01659 112 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 S100a10P08207 97 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 CebpgP53568 150 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gng3P63216 75 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp872Q3UVL3 465 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Prss3Q792Z0 246 aaKnown RBP12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mob1bQ8BPB0 216 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rab11fip5Q8R361 645 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms