RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 P01668 110 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gpr6Q6YNI2 363 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rpusd1Q8VCZ8 306 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Otud1Q9CUB6 454 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 ApelaP0DMC4 54 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 4930426L09RikE9Q0N7 123 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Atp6v0cP63082 155 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Smad4P97471 551 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Adgrg5Q3V3Z3 524 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rae1Q8C570 368 aaKnown RBP12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Ercc8Q8CFD5 397 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Siglec12Q91Y57 467 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 NpffQ9WVA8 114 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Aadacl3A2A7Z8 408 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 MestQ07646 335 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Fbln7Q501P1 440 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Atp5lQ9CPQ8 103 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 SrfQ9JM73 504 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Dock4P59764 1978 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr1029A2ATE0 324 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Q3U1D9 316 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm20773A0A0A6YXW2 232 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm20795J3QP49 232 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm21440Q3TTD8 232 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tex101Q9JMI7 250 aa12.16□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Iqcf6G3UWF2 157 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Olfr1012Q8VFJ7 311 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rnase4Q9JJH1 148 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Arid2E9Q7E2 1828 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm20807A0A0A6YXX7 232 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Rpl36-ps4A0A140T8U4 117 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Obp2bA2BHR0 176 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm7714E9Q079 131 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 AsipQ03288 131 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 PigpQ9JHG1 132 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Igkv4-91A0A075B5L2 119 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Q3TEI4 1023 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Trav12-2A0N8N6 114 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm4791J3QQ14 102 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Wipi1Q8R3E3 446 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 MmdQ9CQY7 238 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Tmem186Q9CR76 216 aa12.15□□□□□ -0.46
Col5a1-201ENSMUST00000028280 Gm45717A0A1B0GT68 152 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 OsmP53347 263 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 B020031M17RikQ3UT11 173 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trdv2-2Q5R1A4 116 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Prss35Q8C0F9 409 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Spcs1Q9D958 161 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Med12A2AGH6 2190 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 PtprdQ64487 1912 aa12.15□□□□□ -0.47
Col5a1-201ENSMUST00000028280 TbpP29037 316 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Hoxb2P0C1T1 354 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 BC106179Q8C9L1 186 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cd99Q8VCN6 175 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 DapQ91XC8 102 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 1700034E13RikQ9D2T6 108 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Mettl26Q9DCS2 204 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ly96Q9JHF9 160 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm28729A0A1B0GSW2 409 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 PnlipQ6P8U6 465 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Zfp933Q6PEE4 468 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Defb35Q8R2I3 63 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Coa3Q9D2R6 108 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ptprz1B9EKR1 2312 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Defb7Q91V70 71 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Mfap4Q9D1H9 257 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr961Q9EQ84 314 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 NgfrQ9Z0W1 417 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 SelenotP62342 195 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr1131Q7TR45 309 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm5868Q8BJG1 145 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 SowahbQ8BZW2 760 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Clec14aQ8VCP9 459 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 SiglechB7ZMQ6 332 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Slc35d2Q762D5 326 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gm5148Q8BGG2 154 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Utp23Q9CX11 249 aaKnown RBP12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Erg28Q9ERY9 140 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ighv1-13A0A075B5I0 98 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Gltpd2Q8K0R6 321 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr513Q8VFZ3 309 aa12.14□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Myo7bQ99MZ6 2113 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tspoap1Q7TNF8 1846 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Foxc2Q61850 494 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Tlcd2Q8VC26 310 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cldn10Q9Z0S6 231 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Ighv5-17A0A075B5R1 117 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr466E9Q2B9 308 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 P01795 144 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Hoxd11P23813 323 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Rasl11aQ6IMB1 242 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Olfr1168Q7TR25 312 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Wnt2bO70283 389 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Mmp23O88676 391 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Wfdc5Q4KXB6 126 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 SepsecsQ6P6M7 504 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Cd177Q8R2S8 817 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Trav12n-2A0A075B626 113 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 H2-M5A7VMS3 348 aa12.13□□□□□ -0.47
Col5a1-201ENSMUST00000028280 Hivep3A2A884 2348 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms