RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm42420A0A0J9YUQ2 99 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Tmem92B7ZWI3 162 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm20830J3KML6 227 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Ren1P06281 402 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Tas2r41P59532 308 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Zfp872Q3UVL3 465 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Il31Q6EAL8 163 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Onecut2Q6XBJ3 505 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 9030612E09RikQ8CE20 140 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Ms4a4cQ9D3F6 226 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Col6a6Q8C6K9 2265 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Fcgr4A0A0B4J1G0 249 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm12830F6XVH0 157 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm21719J3KMI9 230 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr191L7N1Z8 309 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Nkx2-8O70584 235 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Stfa1P35175 97 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Trp53rkaQ5U452 244 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr1269Q8VEZ2 309 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr509Q8VF20 321 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr57Q8VGU7 319 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Pth2Q91W27 100 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Tbx19Q99ME7 446 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Tp53rkQ99PW4 244 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Atg101Q9D8Z6 218 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Dctn5Q9QZB9 182 aa13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 NacaP70670 2187 aaKnown RBP13.72□□□□□ -0.21
Shh-201ENSMUST00000002708 Ighv6-3A0A075B5T2 118 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Lrrc3cA0A1B0GRI5 255 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 RelP15307 587 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Zfp970Q08BU3 522 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm813Q3UWK9 176 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Bud31Q6PGH1 103 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr137Q8VFC2 312 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr1370Q8VFG4 316 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr355Q8VFP6 310 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Cacng8Q8VHW2 423 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Mrpl42Q9CPV3 142 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Tbx21Q9JKD8 530 aa13.71□□□□□ -0.21
Shh-201ENSMUST00000002708 Vmn1r113G3UWI8 307 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 CxadrP97792 365 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Ovch2Q7M761 609 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1384Q8VFA8 318 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Wasf3Q8VHI6 501 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Mad2l1bpQ9DCX1 276 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Tusc2Q9WVF8 110 aa13.71□□□□□ -0.22
Shh-201ENSMUST00000002708 Lnp1A0A1B0GSK3 178 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1016A2ASV2 309 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm9972E9Q053 102 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm20532G3UXR8 106 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 SdcbpO08992 299 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Hoxb2P0C1T1 354 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Ctdsp1P58466 261 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Pax8Q00288 457 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Rac2Q05144 192 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Mob1bQ8BPB0 216 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Fam78bQ8BQN5 261 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Psg16Q8K0U8 395 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Ssmem1Q9D9Y8 244 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Gpr132Q9Z282 382 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm14412A2ARR7 526 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm5239D3YYZ2 122 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr92L7N475 312 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 TymsP07607 307 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Ifna16Q810G1 189 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Timm21Q8CCM6 249 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Klre1Q8CJC7 226 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Cdc42ep2Q8JZX9 214 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 IdnkQ8R0J8 184 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr195Q8VGQ6 308 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Epdr1Q99M71 224 aa13.7□□□□□ -0.22
Shh-201ENSMUST00000002708 Igkv4-51A0N8I8 119 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr221B2RVX8 311 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Pwwp2bE9Q9M8 600 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Slc25a31Q3V132 320 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Rnf115Q9D0C1 305 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Tex36Q9D5N9 219 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm28845A0A087WR76 214 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm6034E9Q101 117 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr920E9Q413 310 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm19684G3UZ45 117 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Wnt2P21552 360 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Col8a2P25318 699 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Hspb7P35385 169 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 SnrpcQ62241 159 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Znf474Q6V5K9 347 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Zfp273Q7M6W8 501 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr917Q7TRC3 309 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 BsxQ810B3 232 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1413Q8VGU3 323 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Fbxo25Q9D2Y6 357 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Vmn1r44Q9EQ47 310 aa13.69□□□□□ -0.22
Shh-201ENSMUST00000002708 Ctxnd1A0A1B0GST9 59 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Zfp971A2BFG8 470 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr872E9PVW2 323 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm14288E9Q9W0 88 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm28051J3QMA2 81 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Ifna6P07350 189 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Rab4aP56371 218 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Bex6Q3TZW7 114 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms